Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.309296	Rims2	regulating synaptic membrane exocytosis 2	15	15 16.0 cM	116838
Mm.309296	AU021889	expressed sequence AU021889	15		105972
Mm.309296	4932442A14Rik	RIKEN cDNA 4932442A14 gene	15		320136
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC ATTTTTGTTT (16) 1.6 0.0016 P8 Cb GC GACACAGATT (3) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma GACACAGATT (3) 16.2 0.0162 Cb medulloblastoma TGTGCCCCAG (6) 9.2 0.0092 Cb medulloblastoma ATTTTTGTTT (16) 2.3 0.0023 Cb medulloblastoma CCTGCCTCCC (8) 2.3 0.0023 Cb medulloblastoma GGGTTTTTTC (6) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture ATTTTTGTTT (16) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture ATTTTTGTTT (16) 5.9 0.0059 P8 GC+SHH+1d culture GAAATAGCAC (4) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts CTGAGGGATG (4) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex TGTGCCCCAG (6) 9.9 0.0099 E15 cortex CCTGCCTCCC (8) 4.9 0.0049 E15 cortex GACACAGATT (3) 4.9 0.0049 P1 cortex TGTGCCCCAG (6) 13.6 0.0136 P1 cortex TCTCCTTTCT (8) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TGTGCCCCAG (6) 9.1 0.0091 Hypothalamus GAAATAGCAC (4) 1.8 0.0018 Hypothalamus GACACAGATT (3) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina ATTTTTGTTT (16) 3.8 0.0038 E12.5 retina GACACAGATT (3) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina CGTGCTATCA (3) 10.9 0.0109 E14.5 retina GACACAGATT (3) 3.6 0.0036 E14.5 retina TCTCCTTTCT (8) 3.6 0.0036 E14.5 retina TGTGCCCCAG (6) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TGTGCCCCAG (6) 9.1 0.0091 E16.5 retina ATTTTTGTTT (16) 1.8 0.0018 E16.5 retina CTGAGGGATG (4) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGTGCCCCAG (6) 10.9 0.0109 E18.5 retina ATTTTTGTTT (16) 1.8 0.0018 E18.5 retina CGTGCTATCA (3) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGTGCCCCAG (6) 11.8 0.0118 P0.5 retina GACACAGATT (3) 2 0.002 P0.5 retina GGGTTTTTTC (6) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGTGCCCCAG (6) 10.6 0.0106 P2.5 retina GACACAGATT (3) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGTGCCCCAG (6) 15.9 0.0159 P4.5 retina ATTTTTGTTT (16) 2 0.002 P4.5 retina CCTGCCTCCC (8) 2 0.002 P4.5 retina CTGAGGGATG (4) 2 0.002 P4.5 retina GACACAGATT (3) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TGTGCCCCAG (6) 16.7 0.0167 P6.5 retina GACACAGATT (3) 3.3 0.0033 P6.5 retina ATTTTTGTTT (16) 1.7 0.0017 P6.5 retina TCTCCTTTCT (8) 1.7 0.0017 P10.5 crx- retina TGTGCCCCAG (6) 20.4 0.0204 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina GACACAGATT (3) 7.4 0.0074 P10.5 crx- retina ATTTTTGTTT (16) 1.9 0.0019 P10.5 crx- retina GAAATAGCAC (4) 1.9 0.0019 P10.5 crx- retina TCTCCTTTCT (8) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TGTGCCCCAG (6) 13.5 0.0135 P10.5 crx+ retina GAAATAGCAC (4) 7.7 0.0077 P10.5 crx+ retina ATTTTTGTTT (16) 5.8 0.0058 P10.5 crx+ retina GACACAGATT (3) 5.8 0.0058 P10.5 crx+ retina CCTGCCTCCC (8) 3.8 0.0038 Adult retinal TGTGCCCCAG (6) 31.5 0.0315 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal GACACAGATT (3) 7.4 0.0074 Adult retinal ATTTTTGTTT (16) 1.9 0.0019 Adult retinal CTGAGGGATG (4) 1.9 0.0019 Adult retinal GAAATAGCAC (4) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL ATTTTTGTTT (16) 13.4 0.0134 ONL GACACAGATT (3) 5.7 0.0057 ONL TGTGCCCCAG (6) 5.7 0.0057 ONL GAAATAGCAC (4) 1.9 0.0019 ONL GGGTTTTTTC (6) 1.9 0.0019 ONL TCTCCTTTCT (8) 1.9 0.0019