Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.31012	D130064H19Rik	RIKEN cDNA D130064H19 gene	13		218613
Gene Ontology	calcium ion binding | DNA binding | nucleus
Human Homolog	FLJ35954[hypothetical protein FLJ35954]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATTTCAAA 21.2 0.0212 P8 Cb GC GTCAACTGCT 6.5 0.0065 Cb medulloblastoma CTATTTCAAA 16.2 0.0162 Cb medulloblastoma TAAAATAGCT (2) 2.3 0.0023 P8 GC+1d culture CTATTTCAAA 11.4 0.0114 P8 GC+1d culture TAAAATAGCT (2) 1.1 0.0011 P8 GC+1d culture TCAGCTCCTT (4) 1.1 0.0011 P8 GC+1d culture TTGCATATTG (3) 1.1 0.0011 P8 GC+SHH+1d culture CTATTTCAAA 19.9 0.0199 P8 GC+SHH+1d culture GTCAACTGCT 3.5 0.0035 P8 GC+SHH+1d culture TTGCATATTG (3) 1.2 0.0012 3T3 fibroblasts CTATTTCAAA 3.5 0.0035 E15 cortex AAAAGAGGAA (4) 4.9 0.0049 E15 cortex CTATTTCAAA 4.9 0.0049 E15 cortex GTCAACTGCT 4.9 0.0049 P1 cortex AAAAGAGGAA (4) 9.1 0.0091 P1 cortex CTATTTCAAA 4.5 0.0045 Hypothalamus CTATTTCAAA 32.6 0.0326 Hypothalamus GTCAACTGCT 1.8 0.0018 E12.5 retina CTATTTCAAA 5.6 0.0056 E12.5 retina GTCAACTGCT 1.9 0.0019 E14.5 retina CTATTTCAAA 3.6 0.0036 E14.5 retina CCTGATGTGA 1.8 0.0018 E14.5 retina TTGCATATTG (3) 1.8 0.0018 E16.5 retina CTATTTCAAA 10.9 0.0109 E16.5 retina GTCAACTGCT 1.8 0.0018 E18.5 retina CTATTTCAAA 21.8 0.0218 P0.5 retina CTATTTCAAA 5.9 0.0059 P0.5 retina GTCAACTGCT 5.9 0.0059 P0.5 retina AAAAGAGGAA (4) 2 0.002 P0.5 retina CTGGTGTGCT (4) 2 0.002 P2.5 retina CTATTTCAAA 14.1 0.0141 P2.5 retina GTCAACTGCT 3.5 0.0035 P2.5 retina TAAAATAGCT (2) 1.8 0.0018 P2.5 retina TCAGCTCCTT (4) 1.8 0.0018 P4.5 retina CTATTTCAAA 19.8 0.0198 P4.5 retina CTGGTGTGCT (4) 4 0.004 P4.5 retina AAAAGAGGAA (4) 2 0.002 P6.5 retina CTATTTCAAA 21.7 0.0217 P6.5 retina GTCAACTGCT 1.7 0.0017 P6.5 retina TTGCATATTG (3) 1.7 0.0017 P10.5 crx- retina CTATTTCAAA 29.7 0.0297 P10.5 crx- retina CCTGATGTGA 3.7 0.0037 P10.5 crx- retina GTCAACTGCT 1.9 0.0019 P10.5 crx+ retina CTATTTCAAA 19.2 0.0192 P10.5 crx+ retina GTCAACTGCT 1.9 0.0019 P10.5 crx+ retina TTGCATATTG (3) 1.9 0.0019 Adult retinal CTATTTCAAA 20.4 0.0204 Adult retinal AAAAGAGGAA (4) 5.6 0.0056 ONL CTATTTCAAA 7.7 0.0077 ONL TCAGCTCCTT (4) 3.8 0.0038 ONL AAAAGAGGAA (4) 1.9 0.0019 ONL GTCAACTGCT 1.9 0.0019 ONL TAAAATAGCT (2) 1.9 0.0019