Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.311292	Luc7l	Luc7 homolog (S. cerevisiae)-like	17	17 11.8 cM	66978
Mm.311292	Pabpc1	poly A binding protein, cytoplasmic 1	15		18458
Gene Ontology	RNA binding
Human Homolog	PABPC1[poly(A) binding protein, cytoplasmic 1] | PABPC1[poly(A) binding protein, cytoplasmic 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCGAGTCTC (4) 44 0.044 P8 Cb GC GCAGCTATCC (4) 4.9 0.0049 P8 Cb GC GCAGTGATTT (8) 1.6 0.0016 P8 GC+1d culture CTCGAGTCTC (4) 17.1 0.0171 P8 GC+1d culture GCAGCTATCC (4) 1.1 0.0011 P8 GC+SHH+1d culture CTCGAGTCTC (4) 36.3 0.0363 P8 GC+SHH+1d culture GCAGCTATCC (4) 1.2 0.0012 3T3 fibroblasts CTCGAGTCTC (4) 175.2 0.1752 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GTAACTTGTG (4) 3.5 0.0035 E15 cortex CTCGAGTCTC (4) 19.8 0.0198 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CTCGAGTCTC (4) 13.6 0.0136 Hypothalamus CTCGAGTCTC (4) 3.6 0.0036 E12.5 retina CTCGAGTCTC (4) 30 0.03 E14.5 retina CTCGAGTCTC (4) 9.1 0.0091 E14.5 retina GCTTGAATTA (4) 1.8 0.0018 E16.5 retina CTCGAGTCTC (4) 9.1 0.0091 E16.5 retina GCAGCTATCC (4) 1.8 0.0018 E16.5 retina GTAACTTGTG (4) 1.8 0.0018 E18.5 retina CTCGAGTCTC (4) 7.3 0.0073 E18.5 retina GCAGCTATCC (4) 1.8 0.0018 E18.5 retina GCTTGAATTA (4) 1.8 0.0018 P0.5 retina CTCGAGTCTC (4) 37.3 0.0373 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina CTCGAGTCTC (4) 10.6 0.0106 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CTCGAGTCTC (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CTCGAGTCTC (4) 13.3 0.0133 P6.5 retina GCAGCTATCC (4) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina CTCGAGTCTC (4) 11.1 0.0111 P10.5 crx- retina GCAGTGATTT (8) 1.9 0.0019 P10.5 crx- retina GCTTGAATTA (4) 1.9 0.0019 P10.5 crx- retina GTAACTTGTG (4) 1.9 0.0019 P10.5 crx+ retina CTCGAGTCTC (4) 5.8 0.0058 P10.5 crx+ retina GCAGCTATCC (4) 3.8 0.0038 P10.5 crx+ retina GCAGTGATTT (8) 1.9 0.0019 P10.5 crx+ retina GCTTGAATTA (4) 1.9 0.0019 Adult retinal CTCGAGTCTC (4) 11.1 0.0111 Adult retinal GCAGTGATTT (8) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CTCGAGTCTC (4) 3.8 0.0038