Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.31274	Nfia	nuclear factor I/A	4	4 45.8 cM	18027
Gene Ontology	DNA binding | DNA replication | intracellular | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	NFIA[nuclear factor I/A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAAAAAGAAA (12) 3.3 0.0033 P8 Cb GC TTTGGTTTGG (5) 3.3 0.0033 P8 Cb GC AGAACTATGC 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma AAAAAAGAAA (12) 6.9 0.0069 Cb medulloblastoma TTTGGTTTGG (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTGGTTTGG (5) 3.4 0.0034 P8 GC+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+1d culture AGAACTATGC 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture AAAAAAGAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture AGAACTATGC 2.3 0.0023 P8 GC+SHH+1d culture TTTGGTTTGG (5) 2.3 0.0023 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex AGAACTATGC 9.9 0.0099 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TTTGGTTTGG (5) 3.6 0.0036 Hypothalamus AGAACTATGC 1.8 0.0018 Hypothalamus TGAGAATGCA (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina AGAACTATGC 1.8 0.0018 E14.5 retina TTTGGTTTGG (5) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGAGAATGCA (3) 1.8 0.0018 E16.5 retina TTTGGTTTGG (5) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina ACATCTAAAA 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina AAAAAAGAAA (12) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina AAAAAAGAAA (12) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AAAAAAGAAA (12) 1.7 0.0017 P6.5 retina TTTGGTTTGG (5) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AAAAAAGAAA (12) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TTTGGTTTGG (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL AAAAAAGAAA (12) 3.8 0.0038 ONL TGAGAATGCA (3) 1.9 0.0019