Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3128	4931413K12Rik	RIKEN cDNA 4931413K12 gene	11		70987
Mm.3128	Pitpn	phosphatidylinositol transfer protein	11	11 44.11 cM	18738
Gene Ontology	integral to membrane | intracellular | lipid binding | phospholipid binding | transport
Human Homolog	PITPNA[phosphatidylinositol transfer protein, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAAAGAAGAT (4) 1.6 0.0016 P8 Cb GC TATCTTAGAG (2) 1.6 0.0016 Cb medulloblastoma GTGCTGCTCA (4) 4.6 0.0046 Cb medulloblastoma GGAAAGTTGG (2) 2.3 0.0023 Cb medulloblastoma GTGTAGCTGC (3) 2.3 0.0023 Cb medulloblastoma TATGAGGACC (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GTGTAGCTGC (3) 2.3 0.0023 P8 GC+1d culture TAAACTATCT (2) 2.3 0.0023 P8 GC+1d culture TATCTTACAG (3) 1.1 0.0011 P8 GC+1d culture TATCTTAGAG (2) 1.1 0.0011 P8 GC+1d culture TGTGTATCCT (6) 1.1 0.0011 P8 GC+SHH+1d culture GTGTAGCTGC (3) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TATGAGGACC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGTGTATCCT (6) 2.3 0.0023 P8 GC+SHH+1d culture AAAAGAAGAT (4) 1.2 0.0012 P8 GC+SHH+1d culture GCAGCCTTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TATCTTAGAG (2) 1.2 0.0012 3T3 fibroblasts GTGTAGCTGC (3) 28 0.028 3T3 fibroblasts GCAGCCTTCT (4) 7 0.007 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GTGTAGCTGC (3) 4.5 0.0045 P1 cortex TGTGTATCCT (6) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GTGTAGCTGC (3) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GGAAAGTTGG (2) 3.6 0.0036 Hypothalamus TAAACTATCT (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TGGAAGCTAT (4) 3.8 0.0038 E12.5 retina TATCTTAGAG (2) 1.9 0.0019 E12.5 retina TATGAGGACC (3) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GTGTAGCTGC (3) 3.6 0.0036 E14.5 retina TATCTTAGAG (2) 3.6 0.0036 E14.5 retina GCAGCCTTCT (4) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TATCTTACAG (3) 3.6 0.0036 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGTGTATCTT (2) 7.3 0.0073 E18.5 retina GCAGCCTTCT (4) 1.8 0.0018 E18.5 retina GTGTAGCTGC (3) 1.8 0.0018 E18.5 retina TAAACTATCT (2) 1.8 0.0018 E18.5 retina TGGAAGCTAT (4) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCAGCCTTCT (4) 3.9 0.0039 P0.5 retina GTGTAGCTGC (3) 3.9 0.0039 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TAAACTATCT (2) 1.8 0.0018 P2.5 retina TATGAGGACC (3) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GTGTAGCTGC (3) 4 0.004 P4.5 retina AAAAGAAGAT (4) 2 0.002 P4.5 retina TGTGTATCCT (6) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GCAGCCTTCT (4) 3.3 0.0033 P10.5 crx- retina TGTGTATCCT (6) 5.6 0.0056 P10.5 crx- retina GCAGCCTTCT (4) 3.7 0.0037 P10.5 crx- retina GTGTAGCTGC (3) 3.7 0.0037 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GCAGCCTTCT (4) 1.9 0.0019 P10.5 crx+ retina GTGCTGCTCA (4) 1.9 0.0019 P10.5 crx+ retina TATGAGGACC (3) 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GTGTAGCTGC (3) 3.7 0.0037 Adult retinal TATGAGGACC (3) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GTGTAGCTGC (3) 1.9 0.0019 ONL TATCTTACAG (3) 1.9 0.0019 ONL TGTGTATCTT (2) 1.9 0.0019