Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.313263	Rps7	ribosomal protein S7	12		20115
Gene Ontology	cytosolic ribosome (sensu Eukarya) | cytosolic small ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome | structural constituent of ribosome
Human Homolog	RPS7[ribosomal protein S7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAGCTCGA (6) 93 0.093 P8 Cb GC GCGAGAAGCC (2) 11.4 0.0114 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CTCAGCTCGA (2) 1.6 0.0016 Cb medulloblastoma TTCAGCTCGA (6) 18.5 0.0185 Cb medulloblastoma CCCCCCCCCC (20) 2.3 0.0023 Cb medulloblastoma GCGAGAAGCC (2) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTCAGCTCGA (6) 20.5 0.0205 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GCGAGAAGCC (2) 10.3 0.0103 P8 GC+1d culture CCCCCCCCCC (20) 2.3 0.0023 P8 GC+1d culture TTGATATGGG 1.1 0.0011 P8 GC+SHH+1d culture TTCAGCTCGA (6) 46.8 0.0468 P8 GC+SHH+1d culture GCGAGAAGCC (2) 8.2 0.0082 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CCCCCCCCCC (20) 1.2 0.0012 3T3 fibroblasts TTCAGCTCGA (6) 87.6 0.0876 3T3 fibroblasts GCGAGAAGCC (2) 14 0.014 3T3 fibroblasts CTCAGCTCGA (2) 3.5 0.0035 E15 cortex TTCAGCTCGA (6) 108.9 0.1089 E15 cortex CCCCCCCCCC (20) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TTCAGCTCGA (6) 45.5 0.0455 P1 cortex GCGAGAAGCC (2) 4.5 0.0045 P1 cortex TTGATATGGG 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTCAGCTCGA (6) 9.1 0.0091 Hypothalamus GCGAGAAGCC (2) 7.2 0.0072 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TCCAGCTCGA 3.6 0.0036 Hypothalamus TTCTTTACAA (3) 1.8 0.0018 E12.5 retina GCGAGAAGCC (2) 31.9 0.0319 E12.5 retina TTCAGCTCGA (6) 18.8 0.0188 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GCGAGAAGCC (2) 9.1 0.0091 E14.5 retina TTCAGCTCGA (6) 7.3 0.0073 E16.5 retina TTCAGCTCGA (6) 14.5 0.0145 E16.5 retina GCGAGAAGCC (2) 7.2 0.0072 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina ACTGAAATAA (2) 1.8 0.0018 E18.5 retina TTCAGCTCGA (6) 23.6 0.0236 E18.5 retina GCGAGAAGCC (2) 16.4 0.0164 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TTCTTTACAA (3) 5.5 0.0055 E18.5 retina TTGATATGGG 1.8 0.0018 P0.5 retina TTCAGCTCGA (6) 92.2 0.0922 P0.5 retina GCGAGAAGCC (2) 23.6 0.0236 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P2.5 retina TTCAGCTCGA (6) 29.9 0.0299 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCGAGAAGCC (2) 5.3 0.0053 P2.5 retina CCCCCCCCCC (20) 1.8 0.0018 P2.5 retina TCCAGCTCGA 1.8 0.0018 P4.5 retina TTCAGCTCGA (6) 29.7 0.0297 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GCGAGAAGCC (2) 4 0.004 P6.5 retina TTCAGCTCGA (6) 26.7 0.0267 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina ACTGAAATAA (2) 6.7 0.0067 P6.5 retina GCGAGAAGCC (2) 3.3 0.0033 P10.5 crx- retina TTCAGCTCGA (6) 63.2 0.0632 P10.5 crx- retina ACTGAAATAA (2) 13 0.013 P10.5 crx- retina GCGAGAAGCC (2) 3.7 0.0037 P10.5 crx- retina TCCAGCTCGA 1.9 0.0019 P10.5 crx- retina TTCTTTACAA (3) 1.9 0.0019 P10.5 crx- retina TTGATATGGG 1.9 0.0019 P10.5 crx+ retina GCGAGAAGCC (2) 21.1 0.0211 P10.5 crx+ retina TTCAGCTCGA (6) 19.2 0.0192 P10.5 crx+ retina ACTGAAATAA (2) 7.7 0.0077 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CCCCCCCCCC (20) 1.9 0.0019 Adult retinal TTCAGCTCGA (6) 51.8 0.0518 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal ACTGAAATAA (2) 5.6 0.0056 Adult retinal GCGAGAAGCC (2) 1.9 0.0019 Adult retinal TTCTTTACAA (3) 1.9 0.0019 ONL TTCAGCTCGA (6) 24.9 0.0249 ONL GCGAGAAGCC (2) 5.7 0.0057 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ACTGAAATAA (2) 1.9 0.0019 ONL CTCAGCTCGA (2) 1.9 0.0019