Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.313345 Hmgb1high mobility group box 1 5  5 G3 (5 83.0 cM)  15289 
 Gene Ontology DNA binding | DNA packaging | extracellular space | nitric oxide biosynthesis | nitric-oxide synthase regulator activity | nucleus | protein binding | transport
 Human Homolog HMGB1[high-mobility group box 1]
 Clusters 
   Neighbors    

Total 4 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 41 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTCTGCTAAAG (6)21.20.0212
P8 Cb GCGAAATTTAAA (4)11.40.0114
P8 Cb GCGGCAAAGGAG (8)1.60.0016
Cb medulloblastomaGAAATTTAAA (4)2.30.0023
P8 GC+1d cultureGAAATTTAAA (4)36.50.0365
P8 GC+1d cultureTCTGCTAAAG (6)3.40.0034
P8 GC+1d cultureTTTTTCAGTT1.10.0011
P8 GC+SHH+1d cultureGAAATTTAAA (4)59.70.0597
P8 GC+SHH+1d cultureTCTGCTAAAG (6)70.007
P8 GC+SHH+1d cultureGGCAAAGGAG (8)1.20.0012
3T3 fibroblastsTCTGCTAAAG (6)140.014
3T3 fibroblastsGAAATTTAAA (4)70.007
E15 cortexGAAATTTAAA (4)44.50.0445
E15 cortexTCTGCTAAAG (6)19.80.0198
P1 cortexGAAATTTAAA (4)40.90.0409
P1 cortexTCTGCTAAAG (6)4.50.0045
HypothalamusTCTGCTAAAG (6)9.10.0091
HypothalamusGAAATTTAAA (4)5.40.0054
E12.5 retinaGAAATTTAAA (4)78.80.0788
E12.5 retinaTCTGCTAAAG (6)9.40.0094
E14.5 retinaGAAATTTAAA (4)18.20.0182
E14.5 retinaTTTTTCAGTT5.50.0055
E14.5 retinaGGCAAAGGAG (8)1.80.0018
E14.5 retinaTCTGCTAAAG (6)1.80.0018
E16.5 retinaGAAATTTAAA (4)27.20.0272
E16.5 retinaGGCAAAGGAG (8)1.80.0018
E18.5 retinaGAAATTTAAA (4)52.80.0528
E18.5 retinaTCTGCTAAAG (6)5.50.0055
P0.5 retinaGAAATTTAAA (4)39.30.0393
P0.5 retinaTCTGCTAAAG (6)20.002
P2.5 retinaGAAATTTAAA (4)68.60.0686
P2.5 retinaGGCAAAGGAG (8)1.80.0018
P2.5 retinaTCTGCTAAAG (6)1.80.0018
P4.5 retinaGAAATTTAAA (4)43.60.0436
P4.5 retinaTCTGCTAAAG (6)20.002
P6.5 retinaGAAATTTAAA (4)16.70.0167
P6.5 retinaTCTGCTAAAG (6)3.30.0033
P10.5 crx- retinaGAAATTTAAA (4)5.60.0056
P10.5 crx+ retinaGAAATTTAAA (4)11.50.0115
Adult retinalGAAATTTAAA (4)3.70.0037
ONLGAAATTTAAA (4)7.70.0077