Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.314056	Trim27	tripartite motif protein 27	13	13 10.0 cM	19720
Gene Ontology	cytoplasm | DNA binding | intracellular | nucleus | protein ubiquitination | regulation of transcription, DNA-dependent | transcription | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	RFP[ret finger protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAGAAAAA (10) 3.3 0.0033 P8 Cb GC GTCTCTACTG (3) 3.3 0.0033 P8 Cb GC AGTTTGAAGC (6) 1.6 0.0016 P8 Cb GC CCCTGATGAC (2) 1.6 0.0016 Cb medulloblastoma GCCAGAAAAA (10) 13.9 0.0139 Cb medulloblastoma GTCTCTACTG (3) 2.3 0.0023 P8 GC+1d culture GTCTCTACTG (3) 8 0.008 P8 GC+1d culture GCCAGAAAAA (10) 3.4 0.0034 P8 GC+1d culture AGTTTGAAGC (6) 1.1 0.0011 P8 GC+SHH+1d culture GCCAGAAAAA (10) 8.2 0.0082 P8 GC+SHH+1d culture CCCTGATGAC (2) 1.2 0.0012 P1 cortex GTCTCTACTG (3) 9.1 0.0091 Hypothalamus GCCAGAAAAA (10) 7.2 0.0072 E12.5 retina CCCTGATGAC (2) 1.9 0.0019 E12.5 retina GATGGACATC 1.9 0.0019 E12.5 retina GTCTCTACTG (3) 1.9 0.0019 E14.5 retina GCCAGAAAAA (10) 1.8 0.0018 E14.5 retina GTCTCTACTG (3) 1.8 0.0018 E16.5 retina GATGGACATC 1.8 0.0018 E16.5 retina GTCTCTACTG (3) 1.8 0.0018 E18.5 retina GCCAGAAAAA (10) 3.6 0.0036 P0.5 retina GTCTCTACTG (3) 5.9 0.0059 P0.5 retina AGTTTGAAGC (6) 2 0.002 P0.5 retina GCCAGAAAAA (10) 2 0.002 P2.5 retina GCCAGAAAAA (10) 5.3 0.0053 P2.5 retina ATTCCGAAGA (5) 3.5 0.0035 P2.5 retina GTCTCTACTG (3) 3.5 0.0035 P2.5 retina AGTTTGAAGC (6) 1.8 0.0018 P4.5 retina GCCAGAAAAA (10) 5.9 0.0059 P4.5 retina AGTTTGAAGC (6) 2 0.002 P4.5 retina GTCTCTACTG (3) 2 0.002 P6.5 retina GCCAGAAAAA (10) 3.3 0.0033 P6.5 retina GTCTCTACTG (3) 3.3 0.0033 P10.5 crx- retina ATTCCGAAGA (5) 1.9 0.0019 P10.5 crx- retina GTCTCTACTG (3) 1.9 0.0019 P10.5 crx+ retina GCCAGAAAAA (10) 15.4 0.0154 P10.5 crx+ retina AGTTTGAAGC (6) 1.9 0.0019 Adult retinal GCCAGAAAAA (10) 5.6 0.0056 Adult retinal GATGGACATC 1.9 0.0019 Adult retinal GTCTCTACTG (3) 1.9 0.0019 ONL AGTTTGAAGC (6) 3.8 0.0038 ONL GCCAGAAAAA (10) 3.8 0.0038