Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.315118	BC010304	cDNA sequence BC010304	13		218236
Human Homolog	C9orf10[chromosome 9 open reading frame 10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAGCT (3) 17.9 0.0179 P8 Cb GC CTCTCTTCTA (8) 14.7 0.0147 P8 Cb GC GATTGTGAAG 4.9 0.0049 P8 Cb GC GTATTAGTCA 1.6 0.0016 P8 Cb GC TTATTGTCCT 1.6 0.0016 Cb medulloblastoma AAATAAAGCT (3) 16.2 0.0162 Cb medulloblastoma CTCTCTTCTA (8) 9.2 0.0092 Cb medulloblastoma GATTGTGAAG 4.6 0.0046 Cb medulloblastoma ACTGATTTTC (6) 2.3 0.0023 Cb medulloblastoma GTATTAGTCA 2.3 0.0023 P8 GC+1d culture CTCTCTTCTA (8) 14.8 0.0148 P8 GC+1d culture GATTGTGAAG 8 0.008 P8 GC+1d culture AAATAAAGCT (3) 5.7 0.0057 P8 GC+1d culture ACTGATTTTC (6) 1.1 0.0011 P8 GC+1d culture GTGGGGAGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAATAAAGCT (3) 8.2 0.0082 P8 GC+SHH+1d culture CTCTCTTCTA (8) 8.2 0.0082 P8 GC+SHH+1d culture GATTGTGAAG 7 0.007 P8 GC+SHH+1d culture ACTGATTTTC (6) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTCTTTT (6) 2.3 0.0023 P8 GC+SHH+1d culture AGTTAGGGCG 1.2 0.0012 P8 GC+SHH+1d culture GATATCACCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGACAGCCC (2) 1.2 0.0012 3T3 fibroblasts CTCTCTTCTA (8) 21 0.021 3T3 fibroblasts AGTTAGGGCG 3.5 0.0035 E15 cortex AAATAAAGCT (3) 9.9 0.0099 P1 cortex CTCTCTTCTA (8) 13.6 0.0136 P1 cortex AAATAAAGCT (3) 4.5 0.0045 P1 cortex GTTTTCTTTT (6) 4.5 0.0045 Hypothalamus AAATAAAGCT (3) 19.9 0.0199 Hypothalamus CTCTCTTCTA (8) 14.5 0.0145 Hypothalamus GTTTTCTTTT (6) 7.2 0.0072 Hypothalamus AGTTAGGGCG 1.8 0.0018 Hypothalamus GATTGTGAAG 1.8 0.0018 Hypothalamus GTGGGGAGAG (2) 1.8 0.0018 Hypothalamus TGGACAGCCC (2) 1.8 0.0018 E12.5 retina CTCTCTTCTA (8) 18.8 0.0188 E12.5 retina GATTGTGAAG 7.5 0.0075 E12.5 retina AAATAAAGCT (3) 3.8 0.0038 E12.5 retina ACTGATTTTC (6) 3.8 0.0038 E12.5 retina AGTTAGGGCG 1.9 0.0019 E14.5 retina CTCTCTTCTA (8) 18.2 0.0182 E14.5 retina AAATAAAGCT (3) 10.9 0.0109 E14.5 retina GTTTTCTTTT (6) 5.5 0.0055 E14.5 retina GATTGTGAAG 3.6 0.0036 E14.5 retina TTATTGTCCT 3.6 0.0036 E14.5 retina TGGACAGCCC (2) 1.8 0.0018 E16.5 retina CTCTCTTCTA (8) 21.7 0.0217 E16.5 retina AAATAAAGCT (3) 14.5 0.0145 E16.5 retina GATTGTGAAG 10.9 0.0109 E16.5 retina GTTTTCTTTT (6) 1.8 0.0018 E18.5 retina CTCTCTTCTA (8) 12.7 0.0127 E18.5 retina AAATAAAGCT (3) 5.5 0.0055 E18.5 retina GATTGTGAAG 5.5 0.0055 E18.5 retina GTTTTCTTTT (6) 3.6 0.0036 E18.5 retina AGTTAGGGCG 1.8 0.0018 P0.5 retina CTCTCTTCTA (8) 29.4 0.0294 P0.5 retina AAATAAAGCT (3) 7.9 0.0079 P0.5 retina GATTGTGAAG 5.9 0.0059 P0.5 retina ACTGATTTTC (6) 2 0.002 P0.5 retina GTATTAGTCA 2 0.002 P2.5 retina CTCTCTTCTA (8) 21.1 0.0211 P2.5 retina AAATAAAGCT (3) 7 0.007 P2.5 retina GTTTTCTTTT (6) 7 0.007 P2.5 retina GATTGTGAAG 5.3 0.0053 P2.5 retina GTATTAGTCA 3.5 0.0035 P4.5 retina CTCTCTTCTA (8) 13.9 0.0139 P4.5 retina GATTGTGAAG 11.9 0.0119 P4.5 retina AAATAAAGCT (3) 7.9 0.0079 P4.5 retina ACTGATTTTC (6) 4 0.004 P4.5 retina GTATTAGTCA 2 0.002 P4.5 retina GTTTTCTTTT (6) 2 0.002 P4.5 retina TGGACAGCCC (2) 2 0.002 P6.5 retina CTCTCTTCTA (8) 30 0.03 P6.5 retina GATTGTGAAG 11.7 0.0117 P6.5 retina AAATAAAGCT (3) 5 0.005 P6.5 retina GTATTAGTCA 1.7 0.0017 P10.5 crx- retina GATTGTGAAG 18.6 0.0186 P10.5 crx- retina CTCTCTTCTA (8) 13 0.013 P10.5 crx- retina AAATAAAGCT (3) 7.4 0.0074 P10.5 crx- retina GTTTTCTTTT (6) 3.7 0.0037 P10.5 crx- retina ACTGATTTTC (6) 1.9 0.0019 P10.5 crx- retina GTATTAGTCA 1.9 0.0019 P10.5 crx+ retina AAATAAAGCT (3) 13.5 0.0135 P10.5 crx+ retina CTCTCTTCTA (8) 11.5 0.0115 P10.5 crx+ retina GATTGTGAAG 5.8 0.0058 P10.5 crx+ retina GTGGGGAGAG (2) 1.9 0.0019 Adult retinal CTCTCTTCTA (8) 9.3 0.0093 Adult retinal GATTGTGAAG 9.3 0.0093 Adult retinal GTTTTCTTTT (6) 3.7 0.0037 Adult retinal GTATTAGTCA 1.9 0.0019 ONL CTCTCTTCTA (8) 9.6 0.0096 ONL AAATAAAGCT (3) 5.7 0.0057 ONL GATTGTGAAG 3.8 0.0038 ONL GATATCACCA (2) 1.9 0.0019 ONL GTATTAGTCA 1.9 0.0019