Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.31696
A230098A12Rik
RIKEN cDNA A230098A12 gene
9
235472
Mm.31696
A730062M13Rik
RIKEN cDNA A730062M13 gene
9
403346
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCAAAAAAAA (
35
)
22.8
0.0228
P8 Cb GC
CATCACTGAT
(
3
)
3.3
0.0033
P8 Cb GC
AAGGCGGAAG (
2
)
1.6
0.0016
Cb medulloblastoma
CCAAAAAAAA (
35
)
90.2
0.0902
Cb medulloblastoma
CATCACTGAT
(
3
)
2.3
0.0023
P8 GC+1d culture
CTGCCCCCCG (
5
)
409.8
0.4098
P8 GC+1d culture
CCAAAAAAAA (
35
)
38.8
0.0388
P8 GC+SHH+1d culture
CTGCCCCCCG (
5
)
258.8
0.2588
P8 GC+SHH+1d culture
CCAAAAAAAA (
35
)
39.8
0.0398
P8 GC+SHH+1d culture
AAGGCGGAAG (
2
)
2.3
0.0023
E15 cortex
CCAAAAAAAA (
35
)
9.9
0.0099
P1 cortex
CCAAAAAAAA (
35
)
40.9
0.0409
Hypothalamus
CCAAAAAAAA (
35
)
38
0.038
E12.5 retina
CCAAAAAAAA (
35
)
16.9
0.0169
E12.5 retina
CCAAAAATGA
(
7
)
3.8
0.0038
E12.5 retina
AAGGCGGAAG (
2
)
1.9
0.0019
E14.5 retina
CCAAAAAAAA (
35
)
18.2
0.0182
E14.5 retina
AAGGCGGAAG (
2
)
1.8
0.0018
E14.5 retina
CATCACTGAT
(
3
)
1.8
0.0018
E14.5 retina
CCAAAAATGA
(
7
)
1.8
0.0018
E16.5 retina
CCAAAAAAAA (
35
)
16.3
0.0163
E16.5 retina
CATCCCTGAT (
12
)
1.8
0.0018
E18.5 retina
CCAAAAAAAA (
35
)
38.2
0.0382
E18.5 retina
CATCACTGAT
(
3
)
1.8
0.0018
E18.5 retina
CATCCCTGAT (
12
)
1.8
0.0018
P0.5 retina
CCAAAAAAAA (
35
)
29.4
0.0294
P2.5 retina
CCAAAAAAAA (
35
)
44
0.044
P2.5 retina
AGTCCAATGA
(
3
)
1.8
0.0018
P4.5 retina
CCAAAAAAAA (
35
)
39.6
0.0396
P4.5 retina
AAGGCGGAAG (
2
)
2
0.002
P6.5 retina
CCAAAAAAAA (
35
)
38.3
0.0383
P6.5 retina
AGTCCAATGA
(
3
)
3.3
0.0033
P6.5 retina
CCAAAAATGA
(
7
)
1.7
0.0017
P10.5 crx- retina
CCAAAAAAAA (
35
)
14.9
0.0149
P10.5 crx- retina
CATCCCTGAT (
12
)
1.9
0.0019
P10.5 crx- retina
CCAAAAATGA
(
7
)
1.9
0.0019
P10.5 crx+ retina
CCAAAAAAAA (
35
)
38.4
0.0384
P10.5 crx+ retina
CCAAAAATGA
(
7
)
1.9
0.0019
Adult retinal
CCAAAAAAAA (
35
)
35.2
0.0352
ONL
CCAAAAAAAA (
35
)
7.7
0.0077
