Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.319719	Rpl13	ribosomal protein L13	8		270106
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPL13[ribosomal protein L13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 151 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACTGAAGC GCCCGTGCCA GCGCCCAGCC TGACACTTTA (3) TGTACAAAAA TTCAACACTT TTTTTTTTTT (2) 66.8 0.0668 Cb medulloblastoma ATACTGAAGC CGCAAGGCCC GCCCGTGCCA TGACACTTTA (3) TTCAACACTT TTTTTTTTTT (2) 39.2 0.0392 P8 GC+1d culture AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA TGACACTTTA (3) TTCAACACTT TTTTTTTTTT (2) 83.3 0.0833 P8 GC+SHH+1d culture AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA GCGCCCAGCC TGACACTTTA (3) TGTACAAAAA TTAAGTTCTT (2) TTCAACACTT TTTTTTTTTT (2) 87.8 0.0878 3T3 fibroblasts AGCTCAGGGT (2) ATACTGAAGC CACACACATC GCCCGTGCCA TTCAACACTT 136.6 0.1366 E15 cortex AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA GCGCCCAGCC TTTTTTTTTT (2) 49.4 0.0494 P1 cortex ATACTGAAGC TGTACAAAAA TTCAACACTT TTTTTTTTTT (2) 86.3 0.0863 Hypothalamus AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA TGACACTTTA (3) TTCAACACTT TTTTTTTTTT (2) 27.1 0.0271 E12.5 retina ATACTGAAGC CGCAAGGCCC GCCCGTGCCA GGGGATCAGT TGACACTTTA (3) TGCACAAGCA TTAAGTTCTT (2) TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 86.5 0.0865 E14.5 retina AGCTCAGGGT (2) ATACTGAAGC CGCAAGGCCC GCCCGTGCCA TGACACTTTA (3) TGTACAAAAA TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 101.9 0.1019 E16.5 retina AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA GCGCCCAGCC TGCACAAGCA TTCAACACTT TTTTTTTTTT (2) 85 0.085 E18.5 retina AGCTCAGGGT (2) ATACTGAAGC CGCAAGGCCC GCCCGTGCCA TGACACTTTA (3) TGTACAAAAA TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 69 0.069 P0.5 retina AGCTCAGGGT (2) ATACTGAAGC GCCCGTGCCA TGACACTTTA (3) TGCACAAGCA TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 155.1 0.1551 P2.5 retina AGCTCAGGGT (2) ATAATCAAAC ATACTGAAGC GCCCGTGCCA TGACACTTTA (3) TTAAGTTCTT (2) TTCAACACTT TTTTTTTTTT (2) 81 0.081 P4.5 retina ATACTGAAGC GCCCGTGCCA TGACACTTTA (3) TGCACAAGCA TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 53.4 0.0534 P6.5 retina AGCTCAGGGT (2) ATAATCAAAC ATACTGAAGC CCGACTCTTT GCCCGTGCCA TGACACTTTA (3) TTCAACACTT TTTTTTTTTT (2) 48.4 0.0484 P10.5 crx- retina AGCTCAGGGT (2) ATACTGAAGC ATGTTGAAAA CCGACTCTTT GGGGATCAGT TTCAACACTT 74.4 0.0744 P10.5 crx+ retina AGCTCAGGGT (2) ATAATCAAAC ATACTGAAGC ATGTTGAAAA CACACACATC CCGACTCTTT GCACCCAGCT GCCCGTGCCA GGGGATCAGT TGACACTTTA (3) TTCAACACTT TTTTTTTTTT (2) 53.6 0.0536 Adult retinal AGCTCAGGGT (2) ATAATCAAAC ATACTGAAGC ATGTTGAAAA CCGACTCTTT GCCCGTGCCA TGACACTTTA (3) TGCACAAGCA TTCAACACTT TTTTTTTTTT (2) 72.4 0.0724 ONL ATACTGAAGC ATGTTGAAAA CACACACATC CGCAAGGCCC TGACACTTTA (3) TGCACAAGCA TTCAACACTT TTTCTAAAAG TTTTTTTTTT (2) 32.3 0.0323