Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32020	Hrmt1l1	heterogeneous nuclear ribonucleoprotein methyltransferase-like 1 (S. cerevisiae)	10	10 41.0 cM	15468
Gene Ontology	methyltransferase activity | nucleus | RNA processing | S-adenosylmethionine-dependent methyltransferase activity | transferase activity
Human Homolog	HRMT1L1[HMT1 hnRNP methyltransferase-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCTCACA (25) 11.4 0.0114 P8 Cb GC CTCAATAAAT (4) 1.6 0.0016 Cb medulloblastoma ATGGCTCACA (25) 20.8 0.0208 P8 GC+1d culture ATGGCTCACA (25) 33.1 0.0331 P8 GC+1d culture CTCAATAAAT (4) 9.1 0.0091 P8 GC+SHH+1d culture ATGGCTCACA (25) 25.8 0.0258 P8 GC+SHH+1d culture CTCAATAAAT (4) 3.5 0.0035 3T3 fibroblasts ATGGCTCACA (25) 31.5 0.0315 E15 cortex ATGGCTCACA (25) 29.7 0.0297 P1 cortex ATGGCTCACA (25) 13.6 0.0136 P1 cortex CTCAATAAAT (4) 4.5 0.0045 Hypothalamus ATGGCTCACA (25) 43.5 0.0435 Hypothalamus CTCAATAAAT (4) 5.4 0.0054 Hypothalamus GGGAAGAAGA (8) 1.8 0.0018 Hypothalamus TCTCTCGTAG (2) 1.8 0.0018 E12.5 retina ATGGCTCACA (25) 48.8 0.0488 E12.5 retina CTCAATAAAT (4) 3.8 0.0038 E14.5 retina ATGGCTCACA (25) 47.4 0.0474 E14.5 retina CTCAATAAAT (4) 5.5 0.0055 E14.5 retina GGGAAGAAGA (8) 3.6 0.0036 E14.5 retina TCTCTCGTAG (2) 3.6 0.0036 E16.5 retina ATGGCTCACA (25) 58 0.058 E16.5 retina CTCAATAAAT (4) 9.1 0.0091 E18.5 retina ATGGCTCACA (25) 38.2 0.0382 E18.5 retina CTCAATAAAT (4) 12.7 0.0127 P0.5 retina ATGGCTCACA (25) 35.3 0.0353 P0.5 retina CTCAATAAAT (4) 3.9 0.0039 P0.5 retina GCCCAGCACA (3) 3.9 0.0039 P2.5 retina ATGGCTCACA (25) 31.7 0.0317 P2.5 retina CTCAATAAAT (4) 1.8 0.0018 P4.5 retina ATGGCTCACA (25) 23.8 0.0238 P4.5 retina CTCAATAAAT (4) 9.9 0.0099 P6.5 retina ATGGCTCACA (25) 55 0.055 P6.5 retina CTCAATAAAT (4) 1.7 0.0017 P10.5 crx- retina ATGGCTCACA (25) 44.6 0.0446 P10.5 crx+ retina ATGGCTCACA (25) 44.2 0.0442 Adult retinal ATGGCTCACA (25) 33.3 0.0333 Adult retinal CTCAATAAAT (4) 3.7 0.0037 Adult retinal GCCCAGCACA (3) 1.9 0.0019 ONL ATGGCTCACA (25) 49.8 0.0498