Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.321047
Ian6
immune associated nucleotide 6
6
231931
Human Homolog
hIAN2[human immune associated nucleotide 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
ATACATTTAG (
5
)
3.3
0.0033
P8 Cb GC
ACTGTGGCAA
(
3
)
1.6
0.0016
P8 Cb GC
TGTATGTGTG (
9
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GTGTCTCTTC (
10
)
11.6
0.0116
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
AAGGGTTTAT (
7
)
2.3
0.0023
P8 GC+1d culture
ACTGTGGCAA
(
3
)
2.3
0.0023
P8 GC+1d culture
GTGTCTCTTC (
10
)
2.3
0.0023
P8 GC+1d culture
GCCTCTGATA
(
3
)
1.1
0.0011
P8 GC+1d culture
TGTATGTGTG (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GTGTCTCTTC (
10
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
GTGTCTCTTC (
10
)
9.9
0.0099
E15 cortex
AAGGGTTTAT (
7
)
4.9
0.0049
E15 cortex
ACTGTGGCAA
(
3
)
4.9
0.0049
E15 cortex
ATACATTTAG (
5
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
AAGGGTTTAT (
7
)
4.5
0.0045
P1 cortex
ATACATTTAG (
5
)
4.5
0.0045
P1 cortex
TGTATGTGTG (
9
)
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
AAGGGTTTAT (
7
)
1.8
0.0018
Hypothalamus
ATACATTTAG (
5
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
AAGGGTTTAT (
7
)
5.6
0.0056
E12.5 retina
ATACATTTAG (
5
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GTGTCTCTTC (
10
)
12.8
0.0128
E14.5 retina
AAGGGTTTAT (
7
)
7.3
0.0073
E14.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
AAGGGTTTAT (
7
)
9.1
0.0091
E16.5 retina
ATACATTTAG (
5
)
1.8
0.0018
E16.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GTGTCTCTTC (
10
)
3.6
0.0036
E18.5 retina
ACTGTGGCAA
(
3
)
1.8
0.0018
E18.5 retina
TGTATGTGTG (
9
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
ACTGTGGCAA
(
3
)
2
0.002
P0.5 retina
GTGTCTCTTC (
10
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
AAGGGTTTAT (
7
)
1.8
0.0018
P2.5 retina
ACTGTGGCAA
(
3
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
AAGGGTTTAT (
7
)
2
0.002
P4.5 retina
GTGTCTCTTC (
10
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
AAGGGTTTAT (
7
)
6.7
0.0067
P6.5 retina
GTGTCTCTTC (
10
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
AAGGGTTTAT (
7
)
11.1
0.0111
P10.5 crx- retina
ATACATTTAG (
5
)
1.9
0.0019
P10.5 crx- retina
GCCTCTGATA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
AAGGGTTTAT (
7
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GTGTCTCTTC (
10
)
3.7
0.0037
Adult retinal
ACTGTGGCAA
(
3
)
1.9
0.0019
Adult retinal
ATACATTTAG (
5
)
1.9
0.0019
Adult retinal
GCCTCTGATA
(
3
)
1.9
0.0019
Adult retinal
TGTATGTGTG (
9
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
GTGTCTCTTC (
10
)
11.5
0.0115
ONL
TGTATGTGTG (
9
)
1.9
0.0019
