Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.3213 Ldlrlow density lipoprotein receptor 9  9 5.0 cM  16835 
 Gene Ontology calcium ion binding | cholesterol homeostasis | cholesterol metabolism | coated pit | endocytosis | endosome | extracellular space | integral to membrane | lipid transport | lipid transporter activity | low-density lipoprotein receptor activity | membrane | protein binding | receptor activity
 Human Homolog LDLR[low density lipoprotein receptor (familial hypercholesterolemia)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTCTGTCACCT (2)1.60.0016
Cb medulloblastomaTCTGTCACCT (2)9.20.0092
P8 GC+1d cultureTCTGTCACCT (2)4.60.0046
P8 GC+1d cultureGGTAACCTAA3.40.0034
P8 GC+1d cultureTGACAAATCT (2)1.10.0011
P8 GC+SHH+1d cultureTCTGTCACCT (2)9.40.0094
P8 GC+SHH+1d cultureGGTAACCTAA2.30.0023
3T3 fibroblastsGGTAACCTAA3.50.0035
3T3 fibroblastsTCTGTCACCT (2)3.50.0035
E15 cortexTCTGTCACCT (2)4.90.0049
HypothalamusGGTAACCTAA1.80.0018
HypothalamusTCTGTCACCT (2)1.80.0018
E12.5 retinaTCTGTCACCT (2)5.60.0056
E12.5 retinaGGTAACCTAA1.90.0019
E14.5 retinaTCTGTCACCT (2)1.80.0018
E16.5 retinaGGTAACCTAA1.80.0018
E16.5 retinaTCTGTCACCT (2)1.80.0018
E18.5 retinaTCTGTCACCT (2)7.30.0073
E18.5 retinaTGACAAATCT (2)1.80.0018
P0.5 retinaTCTGTCACCT (2)20.002
P2.5 retinaTCTGTCACCT (2)5.30.0053
P4.5 retinaTCTGTCACCT (2)40.004
P6.5 retinaTCTGTCACCT (2)1.70.0017
P10.5 crx- retinaTCTGTCACCT (2)5.60.0056
P10.5 crx+ retinaTCTGTCACCT (2)7.70.0077
Adult retinalTGACAAATCT (2)1.90.0019
ONLTCTGTCACCT (2)5.70.0057