Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.321671	Cntn6	contactin 6	6		53870
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | extracellular space | membrane | transport
Human Homolog	CNTN6[contactin 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 20 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CCTGACTGAG (6) 2.3 0.0023 Cb medulloblastoma GATCTTTGGG (3) 2.3 0.0023 P8 GC+1d culture CCTGACTGAG (6) 2.3 0.0023 P8 GC+SHH+1d culture CCTGACTGAG (6) 3.5 0.0035 E15 cortex CCTGACTGAG (6) 4.9 0.0049 Hypothalamus GATCTTTGGG (3) 1.8 0.0018 E12.5 retina CCTGACTGAG (6) 1.9 0.0019 E12.5 retina GATCTTTGGG (3) 1.9 0.0019 E14.5 retina GAAAATGAGT (2) 3.6 0.0036 E14.5 retina CCTGACTGAG (6) 1.8 0.0018 E16.5 retina GAAAATGAGT (2) 1.8 0.0018 P0.5 retina CCTGACTGAG (6) 3.9 0.0039 P0.5 retina GAAAATGAGT (2) 2 0.002 P0.5 retina GATCTTTGGG (3) 2 0.002 P2.5 retina GAAAATGAGT (2) 1.8 0.0018 P10.5 crx- retina CCTGACTGAG (6) 11.1 0.0111 P10.5 crx- retina GATCTTTGGG (3) 1.9 0.0019 P10.5 crx+ retina CCTGACTGAG (6) 5.8 0.0058 Adult retinal GATCTTTGGG (3) 1.9 0.0019 ONL CCTGACTGAG (6) 5.7 0.0057