Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.324685	Arbp	acidic ribosomal phosphoprotein P0	5		11837
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome | translational elongation
Human Homolog	RPLP0[ribosomal protein, large, P0]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAACATCT (6) 53.8 0.0538 P8 Cb GC ATGCGCAAGG (3) 9.8 0.0098 P8 Cb GC CTGAAAAAAA (10) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CGGATCTGCT (3) 3.3 0.0033 P8 Cb GC CTGCCTCACA (3) 3.3 0.0033 P8 Cb GC GTCTGTGGAG (5) 3.3 0.0033 P8 Cb GC ACTGTGGGTG (9) 1.6 0.0016 P8 Cb GC CCTGAACATC (4) 1.6 0.0016 P8 Cb GC CTGAACATTT (2) 1.6 0.0016 P8 Cb GC GTGAACATCT (3) 1.6 0.0016 P8 Cb GC GTGGCCCTTG (3) 1.6 0.0016 P8 Cb GC TCGCTCCGAG (2) 1.6 0.0016 P8 Cb GC TCTGTGGAGA (5) 1.6 0.0016 Cb medulloblastoma CTGAAAAAAA (10) 18.5 0.0185 Cb medulloblastoma GTGGCCCTTG (3) 9.2 0.0092 Cb medulloblastoma CTGAACATCT (6) 6.9 0.0069 Cb medulloblastoma CATCTGTTAA (2) 4.6 0.0046 Cb medulloblastoma TCTGTGGAGA (5) 4.6 0.0046 Cb medulloblastoma AAATGAAAGG 2.3 0.0023 Cb medulloblastoma CCTGCCCCCC (2) 2.3 0.0023 Cb medulloblastoma GTCTGTGGAG (5) 2.3 0.0023 Cb medulloblastoma GTGAACATCT (3) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture CTGAACATCT (6) 76.5 0.0765 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTGAAAAAAA (10) 9.1 0.0091 P8 GC+1d culture CTGCCTCACA (3) 5.7 0.0057 P8 GC+1d culture GTCTGTGGAG (5) 4.6 0.0046 P8 GC+1d culture ACTGTGGGTG (9) 1.1 0.0011 P8 GC+1d culture CTGAACATCC (4) 1.1 0.0011 P8 GC+1d culture CTGGAACATC (3) 1.1 0.0011 P8 GC+SHH+1d culture CTGAACATCT (6) 66.7 0.0667 P8 GC+SHH+1d culture CTGAAAAAAA (10) 15.2 0.0152 P8 GC+SHH+1d culture CTGCCTCACA (3) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CATCTGTTAA (2) 3.5 0.0035 P8 GC+SHH+1d culture CCTGAACATC (4) 2.3 0.0023 P8 GC+SHH+1d culture CTGAACATCC (4) 2.3 0.0023 P8 GC+SHH+1d culture GTCTGTGGAG (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGCGCAAGG (3) 1.2 0.0012 P8 GC+SHH+1d culture CGGATCTGCT (3) 1.2 0.0012 3T3 fibroblasts CTGAACATCT (6) 147.2 0.1472 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CTGCCTCACA (3) 7 0.007 3T3 fibroblasts GTCTGTGGAG (5) 7 0.007 3T3 fibroblasts TCTGTGGAGA (5) 3.5 0.0035 E15 cortex CTGAACATCT (6) 54.4 0.0544 E15 cortex ATGCGCAAGG (3) 4.9 0.0049 E15 cortex CTGAAAAAAA (10) 4.9 0.0049 E15 cortex CTGAACATCC (4) 4.9 0.0049 E15 cortex CTGCCTCACA (3) 4.9 0.0049 E15 cortex GGATTCGGTC (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex GTGAACATCT (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CTGAACATCT (6) 72.7 0.0727 P1 cortex CTGCCTCACA (3) 9.1 0.0091 P1 cortex GTCTGTGGAG (5) 9.1 0.0091 P1 cortex CTGAAAAAAA (10) 4.5 0.0045 P1 cortex GCTAGTGAAC (3) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus CTGAAAAAAA (10) 14.5 0.0145 Hypothalamus CTGAACATCT (6) 9.1 0.0091 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CGGATCTGCT (3) 1.8 0.0018 Hypothalamus CTGCTGGCCA (10) 1.8 0.0018 E12.5 retina CTGAACATCT (6) 46.9 0.0469 E12.5 retina CTGAAAAAAA (10) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina CTGCCTCACA (3) 3.8 0.0038 E12.5 retina GTCTGTGGAG (5) 3.8 0.0038 E12.5 retina ATGCGCAAGG (3) 1.9 0.0019 E12.5 retina CTGAACATCC (4) 1.9 0.0019 E14.5 retina CTGAACATCT (6) 36.4 0.0364 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina CTGAAAAAAA (10) 5.5 0.0055 E14.5 retina CTGAACATCC (4) 5.5 0.0055 E14.5 retina CATCTGTTAA (2) 3.6 0.0036 E14.5 retina ATGCGCAAGG (3) 1.8 0.0018 E14.5 retina CGGATCTGCT (3) 1.8 0.0018 E14.5 retina CTGGAACATC (3) 1.8 0.0018 E14.5 retina TCGCTCCGAG (2) 1.8 0.0018 E16.5 retina CTGAACATCT (6) 25.4 0.0254 E16.5 retina CTGAAAAAAA (10) 7.2 0.0072 E16.5 retina ACTGTGGGTG (9) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CATCTGTTAA (2) 3.6 0.0036 E16.5 retina ATGCGCAAGG (3) 1.8 0.0018 E16.5 retina CCTGCCCCCC (2) 1.8 0.0018 E16.5 retina CTGAACATCC (4) 1.8 0.0018 E16.5 retina CTGAACATTT (2) 1.8 0.0018 E16.5 retina GTCTGTGGAG (5) 1.8 0.0018 E18.5 retina CTGAACATCT (6) 29.1 0.0291 E18.5 retina CTGAAAAAAA (10) 25.5 0.0255 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGATTCGGTC (2) 7.3 0.0073 E18.5 retina CATCTGTTAA (2) 1.8 0.0018 E18.5 retina CTGCCTCACA (3) 1.8 0.0018 E18.5 retina TGTTTGACAA (4) 1.8 0.0018 P0.5 retina CTGAACATCT (6) 94.2 0.0942 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTGAAAAAAA (10) 5.9 0.0059 P0.5 retina GTCTGTGGAG (5) 5.9 0.0059 P0.5 retina CGGATCTGCT (3) 3.9 0.0039 P0.5 retina CTGCCTCACA (3) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CTGAACATTT (2) 2 0.002 P2.5 retina CTGAACATCT (6) 28.2 0.0282 P2.5 retina CTGAAAAAAA (10) 21.1 0.0211 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CCTGAACATC (4) 1.8 0.0018 P2.5 retina CGGATCTGCT (3) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTCTGTGGAG (5) 1.8 0.0018 P4.5 retina CTGAACATCT (6) 25.8 0.0258 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTGAAAAAAA (10) 7.9 0.0079 P4.5 retina CTGCCTCACA (3) 4 0.004 P4.5 retina CATCTGTTAA (2) 2 0.002 P4.5 retina CGGATCTGCT (3) 2 0.002 P4.5 retina CTGGAACATC (3) 2 0.002 P4.5 retina GCTAGTGAAC (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGTTTGACAA (4) 2 0.002 P6.5 retina CTGAACATCT (6) 30 0.03 P6.5 retina CTGAAAAAAA (10) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AAATGAAAGG 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina CTGCCTCACA (3) 1.7 0.0017 P6.5 retina GTCTGTGGAG (5) 1.7 0.0017 P10.5 crx- retina CTGAACATCT (6) 11.1 0.0111 P10.5 crx- retina CTGAAAAAAA (10) 7.4 0.0074 P10.5 crx- retina CATCTGTTAA (2) 5.6 0.0056 P10.5 crx- retina CTGCCTCACA (3) 5.6 0.0056 P10.5 crx- retina GTCTGTGGAG (5) 5.6 0.0056 P10.5 crx- retina CTGAACATCC (4) 3.7 0.0037 P10.5 crx- retina CTGGAACATC (3) 3.7 0.0037 P10.5 crx- retina GCTAGTGAAC (3) 1.9 0.0019 P10.5 crx- retina TCGCTCCGAG (2) 1.9 0.0019 P10.5 crx- retina TCTGTGGAGA (5) 1.9 0.0019 P10.5 crx+ retina CTGAACATCT (6) 7.7 0.0077 P10.5 crx+ retina CTGAAAAAAA (10) 5.8 0.0058 P10.5 crx+ retina CTGCCTCACA (3) 5.8 0.0058 P10.5 crx+ retina GTCTGTGGAG (5) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AAATGAAAGG 1.9 0.0019 P10.5 crx+ retina ATGCGCAAGG (3) 1.9 0.0019 P10.5 crx+ retina CCTGCCCCCC (2) 1.9 0.0019 P10.5 crx+ retina CTGAACATCC (4) 1.9 0.0019 P10.5 crx+ retina CTGCTGGCCA (10) 1.9 0.0019 P10.5 crx+ retina CTGGAACATC (3) 1.9 0.0019 Adult retinal CTGAACATCT (6) 14.8 0.0148 Adult retinal CTGAAAAAAA (10) 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal CTGCTGGCCA (10) 3.7 0.0037 Adult retinal CATCTGTTAA (2) 1.9 0.0019 Adult retinal CCTGAACATC (4) 1.9 0.0019 Adult retinal CTGAACATCC (4) 1.9 0.0019 Adult retinal CTGCCTCACA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTCTGTGGAG (5) 1.9 0.0019 Adult retinal TGTTTGACAA (4) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL CTGAAAAAAA (10) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAATGAAAGG 1.9 0.0019 ONL CTGAACATCT (6) 1.9 0.0019 ONL CTGCCTCACA (3) 1.9 0.0019 ONL GCTAGTGAAC (3) 1.9 0.0019 ONL GGATTCGGTC (2) 1.9 0.0019