Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3249	Epha4	Eph receptor A4	1	1 43.0 cM	13838
Gene Ontology	adult walking behavior | ATP binding | axon guidance | ephrin receptor activity | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	EPHA4[EphA4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTTTAATT (2) 1.6 0.0016 Cb medulloblastoma AACTTTAGGT 2.3 0.0023 P8 GC+1d culture AACTTTAGGT 1.1 0.0011 P8 GC+1d culture GCTGGGATTT (3) 1.1 0.0011 P8 GC+SHH+1d culture AACTTTAGGT 1.2 0.0012 E15 cortex AACTTTAGGT 19.8 0.0198 E15 cortex CTGCCTCTTC (2) 14.8 0.0148 E15 cortex CACTTTAATT (2) 9.9 0.0099 E15 cortex AAGGGAAAAA (8) 4.9 0.0049 E15 cortex TTTCAGCAAT (2) 4.9 0.0049 P1 cortex ATTACTGTGT 4.5 0.0045 P1 cortex TTTCAGCAAT (2) 4.5 0.0045 Hypothalamus TTTCAGCAAT (2) 18.1 0.0181 Hypothalamus AACTTTAGGT 1.8 0.0018 E16.5 retina ATTACTGTGT 3.6 0.0036 E18.5 retina GCTGGGATTT (3) 1.8 0.0018 E18.5 retina TTTCAGCAAT (2) 1.8 0.0018 P0.5 retina AACTTTAGGT 2 0.002 P2.5 retina CACTTTAATT (2) 3.5 0.0035 P4.5 retina AACTTTAGGT 2 0.002 P4.5 retina CACTTTAATT (2) 2 0.002 P4.5 retina GCTGGGATTT (3) 2 0.002 P10.5 crx- retina AACTTTAGGT 5.6 0.0056 P10.5 crx- retina AAGGGAAAAA (8) 1.9 0.0019 P10.5 crx- retina CACTTTAATT (2) 1.9 0.0019 P10.5 crx- retina TTTCAGCAAT (2) 1.9 0.0019 P10.5 crx+ retina AAGGGAAAAA (8) 1.9 0.0019 Adult retinal TTTCAGCAAT (2) 7.4 0.0074 Adult retinal AACTTTAGGT 5.6 0.0056 ONL TTTCAGCAAT (2) 1.9 0.0019