Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.325307	1110032D12Rik	RIKEN cDNA 1110032D12 gene	5		56334
Gene Ontology	Golgi apparatus | integral to membrane | intracellular protein transport | membrane | protein carrier activity | protein transport | transport
Human Homolog	RNP24[coated vesicle membrane protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 139 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTAACTTGG (2) 21.2 0.0212 P8 Cb GC AAAACCTGTA (3) 8.2 0.0082 P8 Cb GC TCAGTTTTGT 6.5 0.0065 P8 Cb GC TCCAGTTTTT (2) 6.5 0.0065 P8 Cb GC CAACAGCTGC (7) 1.6 0.0016 P8 Cb GC CCAATTTTTT 1.6 0.0016 P8 Cb GC GCTTTGTGCA (3) 1.6 0.0016 P8 Cb GC TCAGTGTTGT (2) 1.6 0.0016 P8 Cb GC TTTCGGATTT (4) 1.6 0.0016 Cb medulloblastoma TGCCAAAAAA (4) 18.5 0.0185 Cb medulloblastoma ATTAACTTGG (2) 16.2 0.0162 Cb medulloblastoma AAAACCTGTA (3) 4.6 0.0046 Cb medulloblastoma CCAATTTTTT 2.3 0.0023 Cb medulloblastoma GAGACAGAAG (9) 2.3 0.0023 Cb medulloblastoma TTTCGGATTT (4) 2.3 0.0023 P8 GC+1d culture ATTAACTTGG (2) 12.6 0.0126 P8 GC+1d culture GGTCGTGTAT (2) 8 0.008 P8 GC+1d culture CCAATTTTTT 5.7 0.0057 P8 GC+1d culture TTTCGGATTT (4) 4.6 0.0046 P8 GC+1d culture TCAGTGTTGT (2) 3.4 0.0034 P8 GC+1d culture TGCCAAAAAA (4) 3.4 0.0034 P8 GC+1d culture TCCAGATTTG (5) 2.3 0.0023 P8 GC+1d culture AAAACCTGTA (3) 1.1 0.0011 P8 GC+1d culture CCCTTCTTGA (5) 1.1 0.0011 P8 GC+1d culture GAGACAGAAG (9) 1.1 0.0011 P8 GC+1d culture TCAGTTTTGT 1.1 0.0011 P8 GC+SHH+1d culture ATTAACTTGG (2) 14.1 0.0141 P8 GC+SHH+1d culture TCCAGTTTTT (2) 10.5 0.0105 P8 GC+SHH+1d culture AAAACCTGTA (3) 8.2 0.0082 P8 GC+SHH+1d culture TGCCAAAAAA (4) 7 0.007 P8 GC+SHH+1d culture GGTCGTGTAT (2) 5.9 0.0059 P8 GC+SHH+1d culture CCAATTTTTT 2.3 0.0023 P8 GC+SHH+1d culture GAACAGCTGC (6) 1.2 0.0012 P8 GC+SHH+1d culture TCAGTTTTGT 1.2 0.0012 P8 GC+SHH+1d culture TTTCGGATTT (4) 1.2 0.0012 3T3 fibroblasts AAAACCTGTA (3) 3.5 0.0035 3T3 fibroblasts ATTAACTTGG (2) 3.5 0.0035 E15 cortex ATTAACTTGG (2) 9.9 0.0099 E15 cortex AAAACCTGTA (3) 4.9 0.0049 E15 cortex TCCAGTTTTT (2) 4.9 0.0049 E15 cortex TGCCAAAAAA (4) 4.9 0.0049 P1 cortex ATTAACTTGG (2) 9.1 0.0091 P1 cortex TCCAGATTTG (5) 4.5 0.0045 Hypothalamus ATTAACTTGG (2) 18.1 0.0181 Hypothalamus AAAACCTGTA (3) 3.6 0.0036 Hypothalamus CCAATTTTTT 1.8 0.0018 Hypothalamus CCCTTCTTGA (5) 1.8 0.0018 Hypothalamus GAACAGCTGC (6) 1.8 0.0018 Hypothalamus TCAGTTTTGT 1.8 0.0018 E12.5 retina AAAACCTGTA (3) 5.6 0.0056 E12.5 retina ATTAACTTGG (2) 5.6 0.0056 E12.5 retina CCAATTTTTT 3.8 0.0038 E12.5 retina CAACAGCTGC (7) 1.9 0.0019 E12.5 retina CCCTTCTTGA (5) 1.9 0.0019 E12.5 retina CTCCTGAGGG 1.9 0.0019 E12.5 retina TCAGTGTTGT (2) 1.9 0.0019 E12.5 retina TCCAGATTTG (5) 1.9 0.0019 E12.5 retina TCCAGTTTTT (2) 1.9 0.0019 E12.5 retina TGCCAAAAAA (4) 1.9 0.0019 E14.5 retina TCCAGTTTTT (2) 7.3 0.0073 E14.5 retina CCAATTTTTT 5.5 0.0055 E14.5 retina GAACAGCTGC (6) 3.6 0.0036 E14.5 retina AAAACCTGTA (3) 1.8 0.0018 E14.5 retina ATTAACTTGG (2) 1.8 0.0018 E14.5 retina TCAGTGTTGT (2) 1.8 0.0018 E14.5 retina TCCAGATTTG (5) 1.8 0.0018 E14.5 retina TTTCGGATTT (4) 1.8 0.0018 E16.5 retina AAAACCTGTA (3) 3.6 0.0036 E16.5 retina ATTAACTTGG (2) 3.6 0.0036 E16.5 retina TCCAGTTTTT (2) 3.6 0.0036 E16.5 retina CCAATTTTTT 1.8 0.0018 E16.5 retina GGTCGTGTAT (2) 1.8 0.0018 E16.5 retina TCCAGATTTG (5) 1.8 0.0018 E16.5 retina TGCCAAAAAA (4) 1.8 0.0018 E18.5 retina ATTAACTTGG (2) 12.7 0.0127 E18.5 retina TCCAGTTTTT (2) 7.3 0.0073 E18.5 retina TCAGTGTTGT (2) 5.5 0.0055 E18.5 retina CAACAGCTGC (7) 3.6 0.0036 E18.5 retina CCAATTTTTT 3.6 0.0036 E18.5 retina GAACAGCTGC (6) 1.8 0.0018 E18.5 retina TCCAGATTTG (5) 1.8 0.0018 E18.5 retina TGCCAAAAAA (4) 1.8 0.0018 P0.5 retina ATTAACTTGG (2) 9.8 0.0098 P0.5 retina TCAGTGTTGT (2) 7.9 0.0079 P0.5 retina TCCAGTTTTT (2) 5.9 0.0059 P0.5 retina CCAATTTTTT 3.9 0.0039 P0.5 retina TCCAGATTTG (5) 3.9 0.0039 P0.5 retina CTCCTGAGGG 2 0.002 P0.5 retina GGTCGTGTAT (2) 2 0.002 P0.5 retina TGCCAAAAAA (4) 2 0.002 P2.5 retina ATTAACTTGG (2) 14.1 0.0141 P2.5 retina TCCAGTTTTT (2) 10.6 0.0106 P2.5 retina CCAATTTTTT 7 0.007 P2.5 retina AAAACCTGTA (3) 3.5 0.0035 P2.5 retina TCAGTGTTGT (2) 3.5 0.0035 P2.5 retina TCCAGATTTG (5) 3.5 0.0035 P2.5 retina CCCTTCTTGA (5) 1.8 0.0018 P2.5 retina CTCCTGAGGG 1.8 0.0018 P2.5 retina GAGACAGAAG (9) 1.8 0.0018 P2.5 retina TGCCAAAAAA (4) 1.8 0.0018 P2.5 retina TTTCGGATTT (4) 1.8 0.0018 P4.5 retina ATTAACTTGG (2) 11.9 0.0119 P4.5 retina CCAATTTTTT 5.9 0.0059 P4.5 retina TCCAGTTTTT (2) 5.9 0.0059 P4.5 retina AAAACCTGTA (3) 2 0.002 P4.5 retina CTCCTGAGGG 2 0.002 P4.5 retina TCAGTTTTGT 2 0.002 P6.5 retina ATTAACTTGG (2) 13.3 0.0133 P6.5 retina AAAACCTGTA (3) 3.3 0.0033 P6.5 retina TCCAGATTTG (5) 3.3 0.0033 P6.5 retina TTTCGGATTT (4) 3.3 0.0033 P6.5 retina CAACAGCTGC (7) 1.7 0.0017 P6.5 retina CCAATTTTTT 1.7 0.0017 P6.5 retina TCAGTTTTGT 1.7 0.0017 P6.5 retina TGCCAAAAAA (4) 1.7 0.0017 P10.5 crx- retina ATTAACTTGG (2) 7.4 0.0074 P10.5 crx- retina AAAACCTGTA (3) 3.7 0.0037 P10.5 crx- retina TTTCGGATTT (4) 3.7 0.0037 P10.5 crx- retina CCAATTTTTT 1.9 0.0019 P10.5 crx- retina GAACAGCTGC (6) 1.9 0.0019 P10.5 crx- retina GCTTTGTGCA (3) 1.9 0.0019 P10.5 crx- retina TCAGTGTTGT (2) 1.9 0.0019 P10.5 crx+ retina ATTAACTTGG (2) 9.6 0.0096 P10.5 crx+ retina AAAACCTGTA (3) 7.7 0.0077 P10.5 crx+ retina TCAGTGTTGT (2) 5.8 0.0058 P10.5 crx+ retina TCAGTTTTGT 1.9 0.0019 Adult retinal ATTAACTTGG (2) 3.7 0.0037 Adult retinal TCCAGATTTG (5) 3.7 0.0037 Adult retinal TGCCAAAAAA (4) 3.7 0.0037 Adult retinal TTTCGGATTT (4) 3.7 0.0037 Adult retinal CCAATTTTTT 1.9 0.0019 ONL ATTAACTTGG (2) 9.6 0.0096 ONL TCAGTGTTGT (2) 3.8 0.0038 ONL TCAGTTTTGT 3.8 0.0038 ONL TGCCAAAAAA (4) 3.8 0.0038 ONL AAAACCTGTA (3) 1.9 0.0019 ONL GAGACAGAAG (9) 1.9 0.0019 ONL TCCAGATTTG (5) 1.9 0.0019 ONL TTTCGGATTT (4) 1.9 0.0019