Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.325564
1110001K21Rik
RIKEN cDNA 1110001K21 gene
16
16 3.0 cM
66911
Human Homolog
SDOS[hypothetical protein MGC11275]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGCCTCTG
(
3
)
8.2
0.0082
P8 Cb GC
CCAGGCAAGC (
14
)
1.6
0.0016
P8 Cb GC
TGGGGCACAG
(
7
)
1.6
0.0016
Cb medulloblastoma
GGGGCCTCTG
(
3
)
9.2
0.0092
Cb medulloblastoma
GGGAAAACAA (
4
)
2.3
0.0023
P8 GC+1d culture
GGGGCCTCTG
(
3
)
16
0.016
P8 GC+1d culture
TGGGGCACAG
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGCCTCTG
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TGGGGCACAG
(
7
)
2.3
0.0023
3T3 fibroblasts
CCAGGCAAGC (
14
)
3.5
0.0035
E15 cortex
GGGGCCTCTG
(
3
)
19.8
0.0198
P1 cortex
GGGGCCTCTG
(
3
)
4.5
0.0045
Hypothalamus
GGGGCCTCTG
(
3
)
14.5
0.0145
Hypothalamus
TGGGGCACAG
(
7
)
7.2
0.0072
Hypothalamus
GGGAAAACAA (
4
)
3.6
0.0036
E12.5 retina
GGGGCCTCTG
(
3
)
22.5
0.0225
E12.5 retina
CCAGGCAAGC (
14
)
1.9
0.0019
E14.5 retina
GGGGCCTCTG
(
3
)
9.1
0.0091
E16.5 retina
GGGGCCTCTG
(
3
)
12.7
0.0127
E16.5 retina
TGGGGCACAG
(
7
)
1.8
0.0018
E18.5 retina
GGGGCCTCTG
(
3
)
21.8
0.0218
E18.5 retina
TGGGGCACAG
(
7
)
3.6
0.0036
P0.5 retina
GGGGCCTCTG
(
3
)
13.7
0.0137
P2.5 retina
GGGGCCTCTG
(
3
)
29.9
0.0299
P2.5 retina
CCAGGCAAGC (
14
)
1.8
0.0018
P4.5 retina
GGGGCCTCTG
(
3
)
23.8
0.0238
P4.5 retina
TGGGGCACAG
(
7
)
4
0.004
P6.5 retina
GGGGCCTCTG
(
3
)
15
0.015
P10.5 crx- retina
GGGGCCTCTG
(
3
)
27.9
0.0279
P10.5 crx+ retina
GGGGCCTCTG
(
3
)
23.1
0.0231
Adult retinal
GGGGCCTCTG
(
3
)
14.8
0.0148
ONL
GGGGCCTCTG
(
3
)
3.8
0.0038
