Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32665	D12Bwg0892e	DNA segment, Chr 12, Brigham & Women's Genetics 0892 expressed	12	12 22.0 cM	52888
Mm.32665	C86942	expressed sequence C86942	9		97564
Mm.32665	B130017P16Rik	RIKEN cDNA B130017P16 gene	9		81907
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	MGC3040[hypothetical protein MGC3040]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCCTTCAA (5) 29.4 0.0294 P8 Cb GC GAAATAAACA (5) 4.9 0.0049 P8 Cb GC GCTTTATTAA (4) 1.6 0.0016 Cb medulloblastoma TTTCCTTCAA (5) 11.6 0.0116 Cb medulloblastoma AGGAGGAAGA (14) 2.3 0.0023 Cb medulloblastoma GAAATAAACA (5) 2.3 0.0023 Cb medulloblastoma GCTTTATAAA (3) 2.3 0.0023 Cb medulloblastoma GTGACAGCAC (8) 2.3 0.0023 P8 GC+1d culture TTTCCTTCAA (5) 29.7 0.0297 P8 GC+1d culture GAAATAAACA (5) 4.6 0.0046 P8 GC+1d culture GCTTTATTAA (4) 2.3 0.0023 P8 GC+1d culture GCTTTATAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTCCTTCAA (5) 23.4 0.0234 P8 GC+SHH+1d culture GCTTTATAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture GCTTTATTAA (4) 2.3 0.0023 3T3 fibroblasts TTTCCTTCAA (5) 10.5 0.0105 E15 cortex AGGAGGAAGA (14) 4.9 0.0049 E15 cortex TTTCCTTCAA (5) 4.9 0.0049 P1 cortex TTTCCTTCAA (5) 9.1 0.0091 P1 cortex AGGAGGAAGA (14) 4.5 0.0045 P1 cortex GAAATAAACA (5) 4.5 0.0045 Hypothalamus TTTCCTTCAA (5) 16.3 0.0163 Hypothalamus GAAATAAACA (5) 12.7 0.0127 Hypothalamus GCTTTATAAA (3) 3.6 0.0036 E12.5 retina TTTCCTTCAA (5) 15 0.015 E12.5 retina GAAATAAACA (5) 3.8 0.0038 E12.5 retina GCTTTATTAA (4) 1.9 0.0019 E14.5 retina TTTCCTTCAA (5) 14.6 0.0146 E14.5 retina GAAATAAACA (5) 9.1 0.0091 E14.5 retina GCTTTATTAA (4) 3.6 0.0036 E14.5 retina GCTTTATAAA (3) 1.8 0.0018 E16.5 retina TTTCCTTCAA (5) 18.1 0.0181 E16.5 retina GAAATAAACA (5) 7.2 0.0072 E16.5 retina TTGCTGTCTG (7) 1.8 0.0018 E18.5 retina GAAATAAACA (5) 7.3 0.0073 E18.5 retina TTTCCTTCAA (5) 3.6 0.0036 E18.5 retina AGGAGGAAGA (14) 1.8 0.0018 E18.5 retina GCTTTATTAA (4) 1.8 0.0018 P0.5 retina GAAATAAACA (5) 3.9 0.0039 P0.5 retina TTTCCTTCAA (5) 3.9 0.0039 P2.5 retina TTTCCTTCAA (5) 8.8 0.0088 P2.5 retina GAAATAAACA (5) 5.3 0.0053 P2.5 retina GCTTTATAAA (3) 3.5 0.0035 P4.5 retina TTTCCTTCAA (5) 9.9 0.0099 P4.5 retina GAAATAAACA (5) 7.9 0.0079 P4.5 retina GCTTTATTAA (4) 5.9 0.0059 P4.5 retina GTGACAGCAC (8) 2 0.002 P4.5 retina TTGCTGTCTG (7) 2 0.002 P6.5 retina GAAATAAACA (5) 13.3 0.0133 P6.5 retina TTTCCTTCAA (5) 10 0.01 P6.5 retina AGGAGGAAGA (14) 1.7 0.0017 P6.5 retina GCTTTATAAA (3) 1.7 0.0017 P10.5 crx- retina TTTCCTTCAA (5) 35.3 0.0353 P10.5 crx- retina AGGAGGAAGA (14) 1.9 0.0019 P10.5 crx- retina GCTTTATTAA (4) 1.9 0.0019 P10.5 crx- retina TATATATAAA (7) 1.9 0.0019 P10.5 crx+ retina TTTCCTTCAA (5) 26.9 0.0269 P10.5 crx+ retina GAAATAAACA (5) 3.8 0.0038 P10.5 crx+ retina GCTTTATAAA (3) 3.8 0.0038 Adult retinal TTTCCTTCAA (5) 9.3 0.0093 Adult retinal GAAATAAACA (5) 1.9 0.0019 Adult retinal GCTTTATAAA (3) 1.9 0.0019 Adult retinal GCTTTATTAA (4) 1.9 0.0019 Adult retinal TTGCTGTCTG (7) 1.9 0.0019 ONL TTTCCTTCAA (5) 11.5 0.0115 ONL TATATATAAA (7) 3.8 0.0038 ONL AGGAGGAAGA (14) 1.9 0.0019 ONL GAAATAAACA (5) 1.9 0.0019 ONL GCTTTATAAA (3) 1.9 0.0019 ONL GTGACAGCAC (8) 1.9 0.0019