Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32744	E030003F13Rik	RIKEN cDNA E030003F13 gene	1		98357
Mm.32744	Opn3	opsin (encephalopsin)	1		13603
Gene Ontology	G-protein coupled photoreceptor activity | G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | phototransduction | rhodopsin-like receptor activity | vision
Human Homolog	OPN3[opsin 3 (encephalopsin, panopsin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 16 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTGTGTTT (3) 8.2 0.0082 Cb medulloblastoma TTGTGTGTTT (3) 6.9 0.0069 P8 GC+1d culture TTGTGTGTTT (3) 10.3 0.0103 P8 GC+SHH+1d culture TTGTGTGTTT (3) 11.7 0.0117 Hypothalamus TTGTGTGTTT (3) 9.1 0.0091 E12.5 retina TTGTGTGTTT (3) 3.8 0.0038 E14.5 retina TTGTGTGTTT (3) 5.5 0.0055 E16.5 retina TTGTGTGTTT (3) 3.6 0.0036 E18.5 retina TTGTGTGTTT (3) 7.3 0.0073 P0.5 retina TTGTGTGTTT (3) 2 0.002 P2.5 retina TTGTGTGTTT (3) 8.8 0.0088 P4.5 retina TTGTGTGTTT (3) 5.9 0.0059 P6.5 retina TTGTGTGTTT (3) 3.3 0.0033 P10.5 crx- retina TTGTGTGTTT (3) 3.7 0.0037 P10.5 crx+ retina TTGTGTGTTT (3) 3.8 0.0038 Adult retinal TTGTGTGTTT (3) 1.9 0.0019