Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328163	Abcb7	ATP-binding cassette, sub-family B (MDR/TAP), member 7	X	X 39.0 cM	11306
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | inner membrane | integral to membrane | integral to plasma membrane | membrane | mitochondrion | nucleotide binding | transport
Human Homolog	ABCB7[ATP-binding cassette, sub-family B (MDR/TAP), member 7] | ABCB7[ATP-binding cassette, sub-family B (MDR/TAP), member 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 134 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTAAAAGG (4) 16.3 0.0163 P8 Cb GC GCCTGTTCCA (5) 14.7 0.0147 P8 Cb GC CTTTTGAGTT (6) 8.2 0.0082 P8 Cb GC TAAAATAAAA (14) 8.2 0.0082 P8 Cb GC GCCCGTGCCA (3) 6.5 0.0065 P8 Cb GC CAGCGAGCTG (3) 1.6 0.0016 P8 Cb GC GCCTCTGCAG (7) 1.6 0.0016 P8 Cb GC GCCTCTGGAG (9) 1.6 0.0016 Cb medulloblastoma TAAAATAAAA (14) 18.5 0.0185 Cb medulloblastoma GCCCGTGCCA (3) 9.2 0.0092 Cb medulloblastoma GCCTGTTCCA (5) 9.2 0.0092 Cb medulloblastoma TTGTAAAAGG (4) 9.2 0.0092 Cb medulloblastoma CTTTTGAGTT (6) 6.9 0.0069 Cb medulloblastoma GCCTCTGGAG (9) 2.3 0.0023 Cb medulloblastoma TCTACAAAAA (6) 2.3 0.0023 P8 GC+1d culture TTGTAAAAGG (4) 20.5 0.0205 P8 GC+1d culture GCCTGTTCCA (5) 16 0.016 P8 GC+1d culture TAAAATAAAA (14) 12.6 0.0126 P8 GC+1d culture CTTTTGAGTT (6) 6.8 0.0068 P8 GC+1d culture GCCCGTGCCA (3) 2.3 0.0023 P8 GC+1d culture CTTTGAAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTGTAAAAGG (4) 31.6 0.0316 P8 GC+SHH+1d culture GCCTGTTCCA (5) 16.4 0.0164 P8 GC+SHH+1d culture GCCCGTGCCA (3) 15.2 0.0152 P8 GC+SHH+1d culture CTTTTGAGTT (6) 8.2 0.0082 P8 GC+SHH+1d culture TAAAATAAAA (14) 8.2 0.0082 P8 GC+SHH+1d culture CAGCGAGCTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCTCTGCAG (7) 1.2 0.0012 P8 GC+SHH+1d culture GGCCTCCTGG (7) 1.2 0.0012 P8 GC+SHH+1d culture TGATAGTTAT (3) 1.2 0.0012 3T3 fibroblasts GACCTGCTCT (3) 21 0.021 3T3 fibroblasts GCCCGTGCCA (3) 21 0.021 3T3 fibroblasts GCCTGTTCCA (5) 14 0.014 3T3 fibroblasts GCCTCTGCAG (7) 3.5 0.0035 3T3 fibroblasts GGCCTCCTGG (7) 3.5 0.0035 E15 cortex GGCCTCCTGG (7) 24.7 0.0247 E15 cortex CAGCGAGCTG (3) 14.8 0.0148 E15 cortex GCCCGTGCCA (3) 9.9 0.0099 E15 cortex GCCTGTTCCA (5) 9.9 0.0099 E15 cortex GCCTCTGGAG (9) 4.9 0.0049 E15 cortex TTGTAAAAGG (4) 4.9 0.0049 P1 cortex TTGTAAAAGG (4) 22.7 0.0227 P1 cortex TAAAATAAAA (14) 13.6 0.0136 Hypothalamus TTGTAAAAGG (4) 16.3 0.0163 Hypothalamus TAAAATAAAA (14) 12.7 0.0127 Hypothalamus CTTTTGAGTT (6) 5.4 0.0054 Hypothalamus GCCTGTTCCA (5) 5.4 0.0054 Hypothalamus CAGCGAGCTG (3) 1.8 0.0018 Hypothalamus GCCCGTGCCA (3) 1.8 0.0018 Hypothalamus GGCCTCCTGG (7) 1.8 0.0018 Hypothalamus TCTACAAAAA (6) 1.8 0.0018 E12.5 retina GCCTGTTCCA (5) 35.7 0.0357 E12.5 retina TTGTAAAAGG (4) 18.8 0.0188 E12.5 retina TAAAATAAAA (14) 11.3 0.0113 E12.5 retina CTTTTGAGTT (6) 7.5 0.0075 E12.5 retina GCCCGTGCCA (3) 5.6 0.0056 E12.5 retina GGCCTCCTGG (7) 1.9 0.0019 E14.5 retina GCCTGTTCCA (5) 20 0.02 E14.5 retina TTGTAAAAGG (4) 18.2 0.0182 E14.5 retina GCCCGTGCCA (3) 7.3 0.0073 E14.5 retina CTTTTGAGTT (6) 3.6 0.0036 E14.5 retina TAAAATAAAA (14) 3.6 0.0036 E14.5 retina CAGCGAGCTG (3) 1.8 0.0018 E14.5 retina CTGGCACATC (3) 1.8 0.0018 E14.5 retina CTTTGAAGTT (2) 1.8 0.0018 E14.5 retina TGATAGTTAT (3) 1.8 0.0018 E14.5 retina TGGTTTGGGG (4) 1.8 0.0018 E16.5 retina GCCCGTGCCA (3) 7.2 0.0072 E16.5 retina GCCTGTTCCA (5) 7.2 0.0072 E16.5 retina TTGTAAAAGG (4) 7.2 0.0072 E16.5 retina TAAAATAAAA (14) 5.4 0.0054 E16.5 retina CAGCGAGCTG (3) 1.8 0.0018 E16.5 retina CTGGCACATC (3) 1.8 0.0018 E16.5 retina CTTTTGAGTT (6) 1.8 0.0018 E16.5 retina GCCTCTGCAG (7) 1.8 0.0018 E16.5 retina TCTACAAAAA (6) 1.8 0.0018 E16.5 retina TGGTTTGGGG (4) 1.8 0.0018 E18.5 retina TTGTAAAAGG (4) 20 0.02 E18.5 retina TAAAATAAAA (14) 14.6 0.0146 E18.5 retina GCCCGTGCCA (3) 9.1 0.0091 E18.5 retina GCCTGTTCCA (5) 3.6 0.0036 E18.5 retina CTGGCACATC (3) 1.8 0.0018 E18.5 retina CTTTTGAGTT (6) 1.8 0.0018 E18.5 retina GCCTCTGCAG (7) 1.8 0.0018 P0.5 retina TTGTAAAAGG (4) 13.7 0.0137 P0.5 retina GCCCGTGCCA (3) 9.8 0.0098 P0.5 retina GCCTGTTCCA (5) 9.8 0.0098 P0.5 retina GCCTCTGGAG (9) 3.9 0.0039 P0.5 retina CAGCGAGCTG (3) 2 0.002 P0.5 retina CTTTTGAGTT (6) 2 0.002 P0.5 retina GGCCTCCTGG (7) 2 0.002 P0.5 retina TAAAATAAAA (14) 2 0.002 P2.5 retina TTGTAAAAGG (4) 15.8 0.0158 P2.5 retina GCCTGTTCCA (5) 14.1 0.0141 P2.5 retina GCCCGTGCCA (3) 12.3 0.0123 P2.5 retina TAAAATAAAA (14) 8.8 0.0088 P2.5 retina GGCCTCCTGG (7) 3.5 0.0035 P2.5 retina CTGGCACATC (3) 1.8 0.0018 P2.5 retina CTTTGAAGTT (2) 1.8 0.0018 P2.5 retina CTTTTGAGTT (6) 1.8 0.0018 P2.5 retina TCTACAAAAA (6) 1.8 0.0018 P4.5 retina TTGTAAAAGG (4) 35.7 0.0357 P4.5 retina TAAAATAAAA (14) 27.7 0.0277 P4.5 retina GCCTGTTCCA (5) 21.8 0.0218 P4.5 retina GCCCGTGCCA (3) 9.9 0.0099 P4.5 retina CTTTTGAGTT (6) 5.9 0.0059 P4.5 retina GGCCTCCTGG (7) 4 0.004 P6.5 retina GCCTGTTCCA (5) 13.3 0.0133 P6.5 retina TAAAATAAAA (14) 11.7 0.0117 P6.5 retina CTTTTGAGTT (6) 6.7 0.0067 P6.5 retina GCCCGTGCCA (3) 5 0.005 P6.5 retina TTGTAAAAGG (4) 5 0.005 P10.5 crx- retina TTGTAAAAGG (4) 22.3 0.0223 P10.5 crx- retina GCCTGTTCCA (5) 11.1 0.0111 P10.5 crx- retina CTTTTGAGTT (6) 9.3 0.0093 P10.5 crx- retina TAAAATAAAA (14) 5.6 0.0056 P10.5 crx+ retina GCCTGTTCCA (5) 25 0.025 P10.5 crx+ retina GCCCGTGCCA (3) 11.5 0.0115 P10.5 crx+ retina TTGTAAAAGG (4) 11.5 0.0115 P10.5 crx+ retina CTTTTGAGTT (6) 3.8 0.0038 P10.5 crx+ retina CTTTGAAGTT (2) 1.9 0.0019 P10.5 crx+ retina TAAAATAAAA (14) 1.9 0.0019 P10.5 crx+ retina TGATAGTTAT (3) 1.9 0.0019 Adult retinal GCCCGTGCCA (3) 16.7 0.0167 Adult retinal TTGTAAAAGG (4) 7.4 0.0074 Adult retinal GCCTGTTCCA (5) 5.6 0.0056 Adult retinal GGCCTCCTGG (7) 3.7 0.0037 Adult retinal CTTTTGAGTT (6) 1.9 0.0019 Adult retinal GACCTGCTCT (3) 1.9 0.0019 Adult retinal TCTACAAAAA (6) 1.9 0.0019 ONL CTTTTGAGTT (6) 11.5 0.0115 ONL GCCTGTTCCA (5) 11.5 0.0115 ONL TTGTAAAAGG (4) 9.6 0.0096 ONL TAAAATAAAA (14) 7.7 0.0077