Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328239	Ube2n	ubiquitin-conjugating enzyme E2N	10		93765
Gene Ontology	ligase activity | protein binding | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism
Human Homolog	UBE2N[ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAATATTT ACCAAAATCT ATGGGGAAGG (2) CAAAAAAAAA (2) CAAGGTTATG GTTAAAGTAC TGGTCATTGC TTGAATGTAA (2) 61.8 0.0618 Cb medulloblastoma CAAAAAAAAA (2) CAAGGTTATG TTGAATGTAA (2) 99.4 0.0994 P8 GC+1d culture AAGCATCAAT AGCAGAGGCT ATGGGGAAGG (2) CAAAAAAAAA (2) GTTAAAGTAC TTGAATGTAA (2) 51.2 0.0512 P8 GC+SHH+1d culture AAGCATCAAT AGCAGAGGCT ATGGGGAAGG (2) CAAAAAAAAA (2) GTTAAAGTAC TTGAATGTAA (2) TTTTCCTTTT (2) 76.1 0.0761 3T3 fibroblasts GAGCCAGAAG 3.5 0.0035 E15 cortex CAAAAAAAAA (2) 34.6 0.0346 P1 cortex AAGCATCAAT ACCAAAATCT CAAAAAAAAA (2) GTTAAAGTAC TTGAATGTAA (2) 45.3 0.0453 Hypothalamus ATGGGGAAGG (2) CAAAAAAAAA (2) TGGTCATTGC TTGAATGTAA (2) 47 0.047 E12.5 retina ACCAAAATCT ATGGGGAAGG (2) CAAAAAAAAA (2) GTTAAAGTAC TTTTCCTTTT (2) 30.1 0.0301 E14.5 retina AAGCATCAAT ATGGGGAAGG (2) CAAAAAAAAA (2) GTTAAAGTAC TTGAATGTAA (2) 16.3 0.0163 E16.5 retina AACAATATTT CAAAAAAAAA (2) GAGCCAGAAG TTGAATGTAA (2) 19.9 0.0199 E18.5 retina AAGCATCAAT CAAAAAAAAA (2) TTGAATGTAA (2) 45.4 0.0454 P0.5 retina CAAAAAAAAA (2) GTTAAAGTAC 145.3 0.1453 P2.5 retina AAGCATCAAT ACCAAAATCT ATGGGGAAGG (2) CAAAAAAAAA (2) GAGCCAGAAG TTGAATGTAA (2) TTTTCCTTTT (2) 65.3 0.0653 P4.5 retina ATGGGGAAGG (2) CAAAAAAAAA (2) TGGTCATTGC TTGAATGTAA (2) 49.6 0.0496 P6.5 retina CAAAAAAAAA (2) CAAGGTTATG TTGAATGTAA (2) 36.7 0.0367 P10.5 crx- retina AGCAGAGGCT CAAAAAAAAA (2) GTTAAAGTAC TTTTCCTTTT (2) 27.9 0.0279 P10.5 crx+ retina AACAATATTT ATGGGGAAGG (2) CAAAAAAAAA (2) TTGAATGTAA (2) 42.3 0.0423 Adult retinal ATGGGGAAGG (2) CAAAAAAAAA (2) GTTAAAGTAC 24.2 0.0242 ONL AAGCATCAAT CAAAAAAAAA (2) GAGCCAGAAG 21 0.021