Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.328549	Eif4a1	eukaryotic translation initiation factor 4A1	11	11 39.0 cM	13681
Gene Ontology	ATP binding | ATP dependent helicase activity | DNA binding | helicase activity | hydrolase activity | nucleic acid binding | protein biosynthesis | RNA binding | translation initiation factor activity
Human Homolog	EIF4A1[eukaryotic translation initiation factor 4A, isoform 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCTCTCAG (2) AGCAACACAG AGGGAGTTCC (4) GTGACCGAAG (2) 44.1 0.0441 Cb medulloblastoma GTGACCGAAG (2) 6.9 0.0069 P8 GC+1d culture GTGACCGAAG (2) 30.8 0.0308 P8 GC+SHH+1d culture AGCAACACAG GTGACCGAAG (2) TTTGGGGGGG (2) 45.7 0.0457 3T3 fibroblasts GTGACCGAAG (2) 80.6 0.0806 E15 cortex CACGGAGATA GTGACCGAAG (2) 44.5 0.0445 P1 cortex GTGACCGAAG (2) 9.1 0.0091 Hypothalamus GTGACCGAAG (2) 5.4 0.0054 E12.5 retina AGCAACACAG GTGACCGAAG (2) 33.8 0.0338 E14.5 retina AATCTCTCAG (2) AGCAACACAG CTTAACCGGA (2) GTGACCGAAG (2) 10.9 0.0109 E16.5 retina AATCTCTCAG (2) AGCAACACAG CACGGAGATA GTGACCGAAG (2) TTTGGGGGGG (2) 16.2 0.0162 E18.5 retina AGCAACACAG AGGGAGTTCC (4) CTTAACCGGA (2) GTGACCGAAG (2) 21.8 0.0218 P0.5 retina AGCAACACAG GTGACCGAAG (2) 29.5 0.0295 P2.5 retina GTGACCGAAG (2) 12.3 0.0123 P4.5 retina GTGACCGAAG (2) 7.9 0.0079 P6.5 retina GTGACCGAAG (2) TTTGGGGGGG (2) 23.3 0.0233 P10.5 crx- retina AGGGAGTTCC (4) GTGACCGAAG (2) 7.5 0.0075 P10.5 crx+ retina AGCAACACAG CTTAACCGGA (2) GTGACCGAAG (2) 36.5 0.0365 Adult retinal GTGACCGAAG (2) 3.7 0.0037 ONL GTGACCGAAG (2) 15.3 0.0153