Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.328741
Prdm15
PR domain containing 15
16
114604
Human Homolog
PRDM15[PR domain containing 15]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAGGCAAG (
5
)
217
0.217
P8 Cb GC
CTGTGACACA (
3
)
1.6
0.0016
P8 Cb GC
TTGTGGTGAC (
26
)
1.6
0.0016
Cb medulloblastoma
AAGAGGCAAG (
5
)
78.6
0.0786
Cb medulloblastoma
TTGTGGTGAC (
26
)
6.9
0.0069
Cb medulloblastoma
TCACATCTGT
(
5
)
2.3
0.0023
P8 GC+1d culture
AAGAGGCAAG (
5
)
149.5
0.1495
P8 GC+1d culture
TTGTGGTGAC (
26
)
9.1
0.0091
P8 GC+1d culture
TCACATCTGT
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AAGAGGCAAG (
5
)
134.7
0.1347
P8 GC+SHH+1d culture
TTGTGGTGAC (
26
)
5.9
0.0059
P8 GC+SHH+1d culture
TCACATCTGT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGTGACACA (
3
)
1.2
0.0012
3T3 fibroblasts
AAGAGGCAAG (
5
)
59.6
0.0596
E15 cortex
AAGAGGCAAG (
5
)
34.6
0.0346
E15 cortex
TTGTGGTGAC (
26
)
4.9
0.0049
P1 cortex
AAGAGGCAAG (
5
)
13.6
0.0136
P1 cortex
TTGTGGTGAC (
26
)
4.5
0.0045
Hypothalamus
AAGAGGCAAG (
5
)
56.1
0.0561
Hypothalamus
TTGTGGTGAC (
26
)
7.2
0.0072
E12.5 retina
AAGAGGCAAG (
5
)
341.7
0.3417
E12.5 retina
TCACATCTGT
(
5
)
5.6
0.0056
E12.5 retina
TTGTGGTGAC (
26
)
3.8
0.0038
E14.5 retina
AAGAGGCAAG (
5
)
147.6
0.1476
E14.5 retina
TTGTGGTGAC (
26
)
7.3
0.0073
E16.5 retina
AAGAGGCAAG (
5
)
128.6
0.1286
E16.5 retina
TTGTGGTGAC (
26
)
14.5
0.0145
E16.5 retina
CTGTGACACA (
3
)
1.8
0.0018
E16.5 retina
TCACATCTGT
(
5
)
1.8
0.0018
E18.5 retina
AAGAGGCAAG (
5
)
223.7
0.2237
E18.5 retina
TTGTGGTGAC (
26
)
9.1
0.0091
P0.5 retina
AAGAGGCAAG (
5
)
155
0.155
P0.5 retina
TTGTGGTGAC (
26
)
7.9
0.0079
P0.5 retina
TCACATCTGT
(
5
)
2
0.002
P2.5 retina
AAGAGGCAAG (
5
)
121.4
0.1214
P2.5 retina
TTGTGGTGAC (
26
)
14.1
0.0141
P2.5 retina
TCACATCTGT
(
5
)
1.8
0.0018
P4.5 retina
AAGAGGCAAG (
5
)
83.2
0.0832
P4.5 retina
TTGTGGTGAC (
26
)
19.8
0.0198
P4.5 retina
TCACATCTGT
(
5
)
4
0.004
P6.5 retina
AAGAGGCAAG (
5
)
83.4
0.0834
P6.5 retina
TTGTGGTGAC (
26
)
11.7
0.0117
P6.5 retina
TCACATCTGT
(
5
)
1.7
0.0017
P10.5 crx- retina
AAGAGGCAAG (
5
)
102.2
0.1022
P10.5 crx- retina
TTGTGGTGAC (
26
)
9.3
0.0093
P10.5 crx- retina
TCACATCTGT
(
5
)
1.9
0.0019
P10.5 crx+ retina
AAGAGGCAAG (
5
)
86.5
0.0865
P10.5 crx+ retina
TTGTGGTGAC (
26
)
23.1
0.0231
Adult retinal
AAGAGGCAAG (
5
)
33.3
0.0333
Adult retinal
TTGTGGTGAC (
26
)
7.4
0.0074
ONL
AAGAGGCAAG (
5
)
47.9
0.0479
ONL
TTGTGGTGAC (
26
)
5.7
0.0057
