Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32889	1300018P11Rik	RIKEN cDNA 1300018P11 gene	6		66892
Gene Ontology	cytoplasm | RNA binding | translation initiation factor activity | translational initiation
Human Homolog	MGC39820[hypothetical protein MGC39820]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC CTTTTGAAGG 1.6 0.0016 P8 Cb GC GATCTGACCC (3) 1.6 0.0016 P8 Cb GC GCTGCTGCCC (12) 1.6 0.0016 P8 Cb GC TTCAAATTTT 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TTCAAATTTT 4.6 0.0046 Cb medulloblastoma GATCTGACCC (3) 2.3 0.0023 Cb medulloblastoma TGGGGTTGGG 2.3 0.0023 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture TTCAAATTTT 4.6 0.0046 P8 GC+1d culture CTTTTGAAGG 2.3 0.0023 P8 GC+1d culture AGGGGCTCGG 1.1 0.0011 P8 GC+1d culture GCTGCTGCCC (12) 1.1 0.0011 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TTCAAATTTT 3.5 0.0035 P8 GC+SHH+1d culture AGGGGCTCGG 2.3 0.0023 E15 cortex AGGGGCTCGG 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 E15 cortex TTCAAATTTT 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex TTCAAATTTT 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus GATCTGACCC (3) 12.7 0.0127 Hypothalamus TGGGGTTGGG 12.7 0.0127 Hypothalamus GCTGCTGCCC (12) 1.8 0.0018 Hypothalamus TTCAAATTTT 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina GATCTGACCC (3) 1.8 0.0018 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina TGGGGTTGGG 1.8 0.0018 E18.5 retina TTCAAATTTT 1.8 0.0018 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GATCTGACCC (3) 2 0.002 P0.5 retina TTCAAATTTT 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TGGGGTTGGG 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GATCTGACCC (3) 2 0.002 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina CTTTTGAAGG 1.7 0.0017 P6.5 retina GATCTGACCC (3) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina GATCTGACCC (3) 3.7 0.0037 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina GATCTGACCC (3) 3.8 0.0038 P10.5 crx+ retina GCTGCTGCCC (12) 1.9 0.0019 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GATCTGACCC (3) 1.9 0.0019 Adult retinal GCTGCTGCCC (12) 1.9 0.0019 Adult retinal TGGGGTTGGG 1.9 0.0019 ONL TGGGGTTGGG 9.6 0.0096 ONL TTAAAAAAAA (80) 7.7 0.0077