Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.32912	Psmb1	proteasome (prosome, macropain) subunit, beta type 1	17	17 8.25 cM	19170
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMB1[proteasome (prosome, macropain) subunit, beta type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGGTCATAT 26.1 0.0261 P8 Cb GC AGGCTGGTGA 11.4 0.0114 P8 Cb GC AGTGTGAGGA 1.6 0.0016 P8 Cb GC CAAATACCCA 1.6 0.0016 P8 Cb GC CTGCAGCCTC 1.6 0.0016 P8 Cb GC GCACTTGCTG 1.6 0.0016 Cb medulloblastoma CGGGTCATAT 34.7 0.0347 Cb medulloblastoma CAAATACCCA 16.2 0.0162 P8 GC+1d culture CGGGTCATAT 22.8 0.0228 P8 GC+1d culture CAAATACCCA 9.1 0.0091 P8 GC+1d culture AGCTGGTGAA (2) 2.3 0.0023 P8 GC+1d culture AGGCTGGTGA 2.3 0.0023 P8 GC+1d culture CTGCAGCCTC 1.1 0.0011 P8 GC+SHH+1d culture CGGGTCATAT 35.1 0.0351 P8 GC+SHH+1d culture CAAATACCCA 4.7 0.0047 P8 GC+SHH+1d culture AGGCTGGTGA 2.3 0.0023 P8 GC+SHH+1d culture AGTGTGAGGA 1.2 0.0012 3T3 fibroblasts CGGGTCATAT 14 0.014 E15 cortex CGGGTCATAT 4.9 0.0049 P1 cortex CGGGTCATAT 4.5 0.0045 Hypothalamus CGGGTCATAT 52.5 0.0525 Hypothalamus CAAATACCCA 12.7 0.0127 Hypothalamus AGGCTGGTGA 1.8 0.0018 Hypothalamus GGACAGTTGT (2) 1.8 0.0018 E12.5 retina CGGGTCATAT 46.9 0.0469 E12.5 retina CAAATACCCA 3.8 0.0038 E14.5 retina CGGGTCATAT 20 0.02 E14.5 retina CAAATACCCA 3.6 0.0036 E14.5 retina AGCTGGTGAA (2) 1.8 0.0018 E14.5 retina GCACTTGCTG 1.8 0.0018 E16.5 retina CGGGTCATAT 21.7 0.0217 E16.5 retina CAAATACCCA 3.6 0.0036 E16.5 retina CTGCAGCCTC 1.8 0.0018 E18.5 retina CGGGTCATAT 67.3 0.0673 E18.5 retina CAAATACCCA 3.6 0.0036 E18.5 retina AGTGTGAGGA 1.8 0.0018 E18.5 retina GGACAGTTGT (2) 1.8 0.0018 P0.5 retina CGGGTCATAT 13.7 0.0137 P0.5 retina CAAATACCCA 3.9 0.0039 P2.5 retina CGGGTCATAT 38.7 0.0387 P2.5 retina CAAATACCCA 8.8 0.0088 P2.5 retina AGTGTGAGGA 3.5 0.0035 P4.5 retina CGGGTCATAT 39.6 0.0396 P4.5 retina CAAATACCCA 9.9 0.0099 P4.5 retina AGTGTGAGGA 2 0.002 P4.5 retina CTGCAGCCTC 2 0.002 P6.5 retina CGGGTCATAT 30 0.03 P6.5 retina AGTGTGAGGA 1.7 0.0017 P6.5 retina CAAATACCCA 1.7 0.0017 P10.5 crx- retina CGGGTCATAT 26 0.026 P10.5 crx- retina CAAATACCCA 9.3 0.0093 P10.5 crx+ retina CGGGTCATAT 51.9 0.0519 P10.5 crx+ retina CAAATACCCA 5.8 0.0058 P10.5 crx+ retina AGTGTGAGGA 1.9 0.0019 P10.5 crx+ retina CTGCAGCCTC 1.9 0.0019 P10.5 crx+ retina GCACTTGCTG 1.9 0.0019 Adult retinal CGGGTCATAT 20.4 0.0204 Adult retinal CAAATACCCA 1.9 0.0019 ONL CGGGTCATAT 9.6 0.0096 ONL AGTGTGAGGA 3.8 0.0038 ONL CAAATACCCA 1.9 0.0019