Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329353	D6Ertd109e	DNA segment, Chr 6, ERATO Doi 109, expressed	6	6 2.0 cM	52117
Mm.329353	C85771	expressed sequence C85771	18		98123
Mm.329353	Etf1	eukaryotic translation termination factor 1	18		225363
Gene Ontology	cytoplasm | protein biosynthesis | translation release factor activity | translation release factor activity, codon specific | translational termination
Human Homolog	ETF1[eukaryotic translation termination factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATACATTTAG (3) CAACTTAAGT (3) 6.6 0.0066 Cb medulloblastoma CAACTTAAGT (3) GCATTCTCGG (3) 4.6 0.0046 P8 GC+1d culture CAACTTAAGT (3) GCATTCTCGG (3) 6.9 0.0069 P8 GC+SHH+1d culture CAACTTAAGT (3) GCATTCTCGG (3) GGTCCGGCAA (3) 8.2 0.0082 3T3 fibroblasts GCATTCTCGG (3) GGTCCGGCAA (3) 17.5 0.0175 E15 cortex ATACATTTAG (3) GCATTCTCGG (3) GGTCCGGCAA (3) 24.6 0.0246 P1 cortex ATACATTTAG (3) 4.5 0.0045 Hypothalamus ATACATTTAG (3) CAACTTAAGT (3) 3.6 0.0036 E12.5 retina ATACATTTAG (3) CAACTTAAGT (3) GCATTCTCGG (3) 11.3 0.0113 E14.5 retina CAACTTAAGT (3) GCATTCTCGG (3) 9.1 0.0091 E16.5 retina ATACATTTAG (3) GCATTCTCGG (3) 7.2 0.0072 E18.5 retina GCATTCTCGG (3) 1.8 0.0018 P0.5 retina CAACTTAAGT (3) 7.9 0.0079 P2.5 retina CAACTTAAGT (3) GCATTCTCGG (3) 12.3 0.0123 P4.5 retina CAACTTAAGT (3) GCATTCTCGG (3) 4 0.004 P6.5 retina CAACTTAAGT (3) GCATTCTCGG (3) 11.7 0.0117 P10.5 crx- retina ATACATTTAG (3) CAACTTAAGT (3) GCATTCTCGG (3) 5.7 0.0057 P10.5 crx+ retina CAACTTAAGT (3) GCATTCTCGG (3) 7.6 0.0076 Adult retinal ATACATTTAG (3) 1.9 0.0019 ONL GCATTCTCGG (3) 7.7 0.0077