Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.32959
Aprin
androgen-induced proliferation inhibitor
5
100710
Mm.32959
D230040J21Rik
RIKEN cDNA D230040J21 gene
5
320216
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 89 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTTGTGT (
4
)
50.6
0.0506
P8 Cb GC
AGGAAAAAAA (
13
)
4.9
0.0049
P8 Cb GC
GACCAGTACT (
4
)
3.3
0.0033
P8 Cb GC
GACCAGGACT (
8
)
1.6
0.0016
P8 Cb GC
GCAACGAAAA
(
3
)
1.6
0.0016
P8 Cb GC
TAATTATATT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGTGTTGTGT (
4
)
69.4
0.0694
Cb medulloblastoma
AGGAAAAAAA (
13
)
9.2
0.0092
Cb medulloblastoma
ATGTCATTTC (
7
)
2.3
0.0023
Cb medulloblastoma
GCAACGAAAA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGTGTTGTGT (
4
)
45.7
0.0457
P8 GC+1d culture
AGGAAAAAAA (
13
)
10.3
0.0103
P8 GC+1d culture
ATGTCATTTC (
7
)
4.6
0.0046
P8 GC+1d culture
GTCACTGTAG
(
2
)
3.4
0.0034
P8 GC+1d culture
GTGAGGGTGT (
4
)
2.3
0.0023
P8 GC+1d culture
TTTTTAAACT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGTTGTGT (
4
)
60.9
0.0609
P8 GC+SHH+1d culture
AGGAAAAAAA (
13
)
10.5
0.0105
P8 GC+SHH+1d culture
GTGAGGGTGT (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
ATGTCATTTC (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
TTTTTAAACT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTTGAGCAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GCAACGAAAA
(
3
)
1.2
0.0012
3T3 fibroblasts
TGTGTTGTGT (
4
)
28
0.028
E15 cortex
TGTGTTGTGT (
4
)
29.7
0.0297
E15 cortex
AGGAAAAAAA (
13
)
9.9
0.0099
E15 cortex
GTGAGGGTGT (
4
)
9.9
0.0099
E15 cortex
GACCAGTACT (
4
)
4.9
0.0049
P1 cortex
TGTGTTGTGT (
4
)
54.5
0.0545
P1 cortex
GTCACTGTAG
(
2
)
9.1
0.0091
P1 cortex
CTTTGAGCAA
(
2
)
4.5
0.0045
Hypothalamus
TGTGTTGTGT (
4
)
32.6
0.0326
Hypothalamus
AGGAAAAAAA (
13
)
3.6
0.0036
Hypothalamus
TAAAGTTAAT
(
3
)
1.8
0.0018
Hypothalamus
TTTTTAAACT
(
2
)
1.8
0.0018
E12.5 retina
TGTGTTGTGT (
4
)
50.7
0.0507
E12.5 retina
GTGAGGGTGT (
4
)
9.4
0.0094
E12.5 retina
ATGTCATTTC (
7
)
5.6
0.0056
E12.5 retina
AGGAAAAAAA (
13
)
1.9
0.0019
E12.5 retina
TTTTTAAACT
(
2
)
1.9
0.0019
E14.5 retina
TGTGTTGTGT (
4
)
31
0.031
E14.5 retina
AGGAAAAAAA (
13
)
9.1
0.0091
E14.5 retina
GTGAGGGTGT (
4
)
7.3
0.0073
E14.5 retina
GACCAGGACT (
8
)
3.6
0.0036
E14.5 retina
ATGTCATTTC (
7
)
1.8
0.0018
E14.5 retina
GACCAGTACT (
4
)
1.8
0.0018
E14.5 retina
TTTTTAAACT
(
2
)
1.8
0.0018
E16.5 retina
TGTGTTGTGT (
4
)
29
0.029
E16.5 retina
ATGTCATTTC (
7
)
5.4
0.0054
E16.5 retina
GTGAGGGTGT (
4
)
5.4
0.0054
E16.5 retina
AGGAAAAAAA (
13
)
3.6
0.0036
E18.5 retina
TGTGTTGTGT (
4
)
50.9
0.0509
E18.5 retina
AGGAAAAAAA (
13
)
16.4
0.0164
E18.5 retina
GTGAGGGTGT (
4
)
7.3
0.0073
E18.5 retina
TTTTTAAACT
(
2
)
1.8
0.0018
P0.5 retina
TGTGTTGTGT (
4
)
55
0.055
P0.5 retina
ATGTCATTTC (
7
)
3.9
0.0039
P0.5 retina
GTCACTGTAG
(
2
)
3.9
0.0039
P0.5 retina
GTGAGGGTGT (
4
)
3.9
0.0039
P2.5 retina
TGTGTTGTGT (
4
)
77.4
0.0774
P2.5 retina
AGGAAAAAAA (
13
)
17.6
0.0176
P2.5 retina
ATGTCATTTC (
7
)
5.3
0.0053
P2.5 retina
GTGAGGGTGT (
4
)
5.3
0.0053
P4.5 retina
TGTGTTGTGT (
4
)
79.3
0.0793
P4.5 retina
AGGAAAAAAA (
13
)
13.9
0.0139
P4.5 retina
GTGAGGGTGT (
4
)
7.9
0.0079
P4.5 retina
ATGTCATTTC (
7
)
2
0.002
P6.5 retina
TGTGTTGTGT (
4
)
71.7
0.0717
P6.5 retina
AGGAAAAAAA (
13
)
8.3
0.0083
P6.5 retina
GTGAGGGTGT (
4
)
8.3
0.0083
P6.5 retina
TAATTATATT
(
2
)
3.3
0.0033
P6.5 retina
TAAAGTTAAT
(
3
)
1.7
0.0017
P10.5 crx- retina
TGTGTTGTGT (
4
)
31.6
0.0316
P10.5 crx- retina
AGGAAAAAAA (
13
)
1.9
0.0019
P10.5 crx- retina
ATGTCATTTC (
7
)
1.9
0.0019
P10.5 crx- retina
TAAAGTTAAT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGTGTTGTGT (
4
)
75
0.075
P10.5 crx+ retina
AGGAAAAAAA (
13
)
13.5
0.0135
P10.5 crx+ retina
GTGAGGGTGT (
4
)
3.8
0.0038
P10.5 crx+ retina
ATGTCATTTC (
7
)
1.9
0.0019
P10.5 crx+ retina
GCAACGAAAA
(
3
)
1.9
0.0019
Adult retinal
TGTGTTGTGT (
4
)
72.2
0.0722
Adult retinal
AGGAAAAAAA (
13
)
9.3
0.0093
Adult retinal
ATGTCATTTC (
7
)
3.7
0.0037
Adult retinal
GTCACTGTAG
(
2
)
3.7
0.0037
Adult retinal
GTGAGGGTGT (
4
)
3.7
0.0037
ONL
TGTGTTGTGT (
4
)
23
0.023
ONL
AGGAAAAAAA (
13
)
17.2
0.0172
ONL
ATGTCATTTC (
7
)
1.9
0.0019
