Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329629	Snx15	sorting nexin 15	19		69024
Gene Ontology	cytosol | intracellular protein transport | intracellular signaling cascade | membrane | protein transport | protein transporter activity | transport
Human Homolog	SNX15[sorting nexin 15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGAACACA (3) TGGTTGCTGG TGTTTTACTC 76.7 0.0767 Cb medulloblastoma CCTGAAAAAA CCTGAACACA (3) TGGTTGCTGG TGTTTTACTC 122.5 0.1225 P8 GC+1d culture CCTGAAAAAA GCCCCAGCCC TATTTAAATT (2) TGGTTGCTGG 60.4 0.0604 P8 GC+SHH+1d culture CCTGAAAAAA CCTGAACACA (3) CTGGTCTCCA TATTTAAATT (2) TGGTTGCTGG 94.9 0.0949 3T3 fibroblasts TGGTTGCTGG 220.8 0.2208 E15 cortex TGGTTGCTGG 277.1 0.2771 P1 cortex TGGTTGCTGG 86.4 0.0864 Hypothalamus CCTGAACACA (3) TGGTTGCTGG TGTTTTACTC TTTTTTCCCT (2) 362.3 0.3623 E12.5 retina GCCCCAGCCC TGGTTGCTGG 169 0.169 E14.5 retina GCCCCAGCCC TGGTTGCTGG TGTTTTACTC 941.9 0.9419 E16.5 retina CCTGAACACA (3) CTGGTCTCCA GCCCCAGCCC TGGTTGCTGG TTTTTTCCCT (2) 780.5 0.7805 E18.5 retina CCTGAAAAAA CCTGAACACA (3) GCCCCAGCCC TGGTTGCTGG 267.4 0.2674 P0.5 retina CCTGAACACA (3) CTGGTCTCCA GCCCCAGCCC TGGTTGCTGG TGTTTTACTC 202.2 0.2022 P2.5 retina GCCCCAGCCC TATTTAAATT (2) TGGTTGCTGG 172.5 0.1725 P4.5 retina CCTGAACACA (3) GCCCCAGCCC TATTTAAATT (2) TGGTTGCTGG 164.4 0.1644 P6.5 retina CCTGAACACA (3) GCCCCAGCCC TATTTAAATT (2) TGGTTGCTGG 163.4 0.1634 P10.5 crx- retina GCCCCAGCCC TGGTTGCTGG TGTTTTACTC 289.8 0.2898 P10.5 crx+ retina CCTGAAAAAA CCTGAACACA (3) GCCCCAGCCC TGGTTGCTGG TGTTTTACTC 121.1 0.1211 Adult retinal CCTGAACACA (3) GCCCCAGCCC TGGTTGCTGG 224.1 0.2241 ONL CCTGAACACA (3) GCCCCAGCCC TGGTTGCTGG 402.2 0.4022