Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.329650
Pcnxl3
pecanex-like 3 (Drosophila)
19
19 A
104401
Gene Ontology
integral to membrane
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCTGAGAAT (
3
)
35.9
0.0359
P8 Cb GC
GCCAGGACTG
(
2
)
1.6
0.0016
P8 Cb GC
GCCAGGCCTG
(
3
)
1.6
0.0016
P8 Cb GC
GGACAAGAGA (
6
)
1.6
0.0016
Cb medulloblastoma
TGCTGAGAAT (
3
)
71.7
0.0717
Cb medulloblastoma
GCCAGGACTG
(
2
)
2.3
0.0023
P8 GC+1d culture
TGCTGAGAAT (
3
)
41.1
0.0411
P8 GC+1d culture
GCCAGGACTG
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
TGCTGAGAAT (
3
)
39.8
0.0398
P8 GC+SHH+1d culture
GCCAGGACTG
(
2
)
5.9
0.0059
3T3 fibroblasts
TGCTGAGAAT (
3
)
14
0.014
3T3 fibroblasts
GCCAGGACTG
(
2
)
3.5
0.0035
E15 cortex
TGCTGAGAAT (
3
)
39.6
0.0396
E15 cortex
GCCAGGACTG
(
2
)
4.9
0.0049
E15 cortex
GCCAGGCCTG
(
3
)
4.9
0.0049
P1 cortex
TGCTGAGAAT (
3
)
13.6
0.0136
Hypothalamus
TGCTGAGAAT (
3
)
18.1
0.0181
E12.5 retina
TGCTGAGAAT (
3
)
52.6
0.0526
E12.5 retina
GCCAGGACTG
(
2
)
1.9
0.0019
E12.5 retina
GCCAGGCCTG
(
3
)
1.9
0.0019
E12.5 retina
GGACAAGAGA (
6
)
1.9
0.0019
E14.5 retina
TGCTGAGAAT (
3
)
61.9
0.0619
E14.5 retina
GGACAAGAGA (
6
)
3.6
0.0036
E14.5 retina
GCCAGGACTG
(
2
)
1.8
0.0018
E16.5 retina
TGCTGAGAAT (
3
)
47.1
0.0471
E18.5 retina
TGCTGAGAAT (
3
)
80
0.08
E18.5 retina
GCCAGGCCTG
(
3
)
3.6
0.0036
P0.5 retina
TGCTGAGAAT (
3
)
66.7
0.0667
P0.5 retina
GCCAGGCCTG
(
3
)
7.9
0.0079
P0.5 retina
GCCAGGACTG
(
2
)
3.9
0.0039
P2.5 retina
TGCTGAGAAT (
3
)
100.3
0.1003
P4.5 retina
TGCTGAGAAT (
3
)
114.9
0.1149
P4.5 retina
GCCAGGACTG
(
2
)
5.9
0.0059
P4.5 retina
GGACAAGAGA (
6
)
2
0.002
P6.5 retina
TGCTGAGAAT (
3
)
95
0.095
P6.5 retina
GCCAGGACTG
(
2
)
10
0.01
P6.5 retina
GCCAGGCCTG
(
3
)
3.3
0.0033
P10.5 crx- retina
TGCTGAGAAT (
3
)
52
0.052
P10.5 crx- retina
GCCAGGACTG
(
2
)
3.7
0.0037
P10.5 crx- retina
GGACAAGAGA (
6
)
1.9
0.0019
P10.5 crx+ retina
TGCTGAGAAT (
3
)
105.7
0.1057
P10.5 crx+ retina
GGACAAGAGA (
6
)
1.9
0.0019
Adult retinal
TGCTGAGAAT (
3
)
40.7
0.0407
ONL
TGCTGAGAAT (
3
)
46
0.046
