Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329666	4921506I22Rik	RIKEN cDNA 4921506I22 gene	19		66704
Human Homolog	RBM30[RNA binding motif protein 30]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCACACG (29) 4.9 0.0049 P8 Cb GC GAGAAAAAAA (18) 3.3 0.0033 P8 Cb GC GCCTCCTCCT (6) 3.3 0.0033 P8 Cb GC TAGTGGCAAG 3.3 0.0033 P8 Cb GC GGAGAAAAAA (15) 1.6 0.0016 Cb medulloblastoma GAGAAAAAAA (18) 11.6 0.0116 Cb medulloblastoma GGAGAAAAAA (15) 9.2 0.0092 Cb medulloblastoma CAGATAGATA (2) 4.6 0.0046 Cb medulloblastoma GTGGCACACG (29) 2.3 0.0023 Cb medulloblastoma TGTCTTCTTG (2) 2.3 0.0023 P8 GC+1d culture GCCTCCTCCT (6) 5.7 0.0057 P8 GC+1d culture GAGAAAAAAA (18) 4.6 0.0046 P8 GC+1d culture CAGATAGATA (2) 1.1 0.0011 P8 GC+1d culture GTGGCACACG (29) 1.1 0.0011 P8 GC+1d culture TAGTGGCAAG 1.1 0.0011 P8 GC+1d culture TGTCTTCTTG (2) 1.1 0.0011 P8 GC+1d culture TTTCAGTAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCACACG (29) 7 0.007 P8 GC+SHH+1d culture GAGAAAAAAA (18) 3.5 0.0035 P8 GC+SHH+1d culture GCCTCCTCCT (6) 1.2 0.0012 P8 GC+SHH+1d culture GGAGAAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture TAGTGGCAAG 1.2 0.0012 P8 GC+SHH+1d culture TGTCTTCTTG (2) 1.2 0.0012 3T3 fibroblasts GTGGCACACG (29) 35 0.035 3T3 fibroblasts GCCTCCTCCT (6) 7 0.007 3T3 fibroblasts TAGTGGCAAG 3.5 0.0035 E15 cortex GTGGCACACG (29) 69.3 0.0693 E15 cortex TGTCTTCTTG (2) 4.9 0.0049 P1 cortex GTGGCACACG (29) 9.1 0.0091 P1 cortex GAGAAAAAAA (18) 4.5 0.0045 Hypothalamus GCCTCCTCCT (6) 14.5 0.0145 Hypothalamus TAGTGGCAAG 3.6 0.0036 Hypothalamus GAGAAAAAAA (18) 1.8 0.0018 Hypothalamus TTTGTATTCT (2) 1.8 0.0018 E12.5 retina GTGGCACACG (29) 13.1 0.0131 E12.5 retina TAGTGGCAAG 1.9 0.0019 E14.5 retina GCCTCCTCCT (6) 54.7 0.0547 E14.5 retina GTGGCACACG (29) 18.2 0.0182 E14.5 retina GAGAAAAAAA (18) 9.1 0.0091 E14.5 retina TTTGTATTCT (2) 1.8 0.0018 E16.5 retina GCCTCCTCCT (6) 34.4 0.0344 E16.5 retina GTGGCACACG (29) 5.4 0.0054 E16.5 retina TAGTGGCAAG 3.6 0.0036 E16.5 retina GAGAAAAAAA (18) 1.8 0.0018 E18.5 retina GCCTCCTCCT (6) 21.8 0.0218 E18.5 retina GTGGCACACG (29) 3.6 0.0036 E18.5 retina GAGAAAAAAA (18) 1.8 0.0018 E18.5 retina TGTCTTCTTG (2) 1.8 0.0018 E18.5 retina TTTCAGTAAA (4) 1.8 0.0018 P0.5 retina GTGGCACACG (29) 5.9 0.0059 P0.5 retina GAGAAAAAAA (18) 2 0.002 P0.5 retina GCCTCCTCCT (6) 2 0.002 P0.5 retina TTTCAGTAAA (4) 2 0.002 P2.5 retina CAGATAGATA (2) 8.8 0.0088 P2.5 retina GTGGCACACG (29) 8.8 0.0088 P2.5 retina GCCTCCTCCT (6) 7 0.007 P2.5 retina TAGTGGCAAG 5.3 0.0053 P2.5 retina GAGAAAAAAA (18) 3.5 0.0035 P2.5 retina GGAGAAAAAA (15) 1.8 0.0018 P4.5 retina GTGGCACACG (29) 13.9 0.0139 P4.5 retina GAGAAAAAAA (18) 5.9 0.0059 P4.5 retina GCCTCCTCCT (6) 4 0.004 P4.5 retina TAGTGGCAAG 2 0.002 P6.5 retina GTGGCACACG (29) 6.7 0.0067 P6.5 retina GCCTCCTCCT (6) 5 0.005 P6.5 retina GAGAAAAAAA (18) 3.3 0.0033 P6.5 retina GGAGAAAAAA (15) 1.7 0.0017 P6.5 retina TAGTGGCAAG 1.7 0.0017 P10.5 crx- retina GCCTCCTCCT (6) 9.3 0.0093 P10.5 crx- retina GAGAAAAAAA (18) 1.9 0.0019 P10.5 crx- retina GTGGCACACG (29) 1.9 0.0019 P10.5 crx- retina TTTCAGTAAA (4) 1.9 0.0019 P10.5 crx+ retina GTGGCACACG (29) 9.6 0.0096 P10.5 crx+ retina GAGAAAAAAA (18) 7.7 0.0077 P10.5 crx+ retina GCCTCCTCCT (6) 5.8 0.0058 P10.5 crx+ retina TAGTGGCAAG 1.9 0.0019 P10.5 crx+ retina TGTCTTCTTG (2) 1.9 0.0019 Adult retinal GTGGCACACG (29) 13 0.013 Adult retinal TAGTGGCAAG 9.3 0.0093 Adult retinal CAGATAGATA (2) 1.9 0.0019 Adult retinal GCCTCCTCCT (6) 1.9 0.0019 Adult retinal GGAGAAAAAA (15) 1.9 0.0019 ONL GTGGCACACG (29) 7.7 0.0077 ONL GAGAAAAAAA (18) 1.9 0.0019 ONL TTTGTATTCT (2) 1.9 0.0019