Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.329996
Ankrd16
ankyrin repeat domain 16
2
320816
Gene Ontology
DNA binding
Human Homolog
ANKRD16[ankyrin repeat domain 16]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAGCAAAAC (
10
)
1.6
0.0016
P8 Cb GC
CCTGGTGCCT (
7
)
1.6
0.0016
P8 Cb GC
GTGGTGCATA (
8
)
1.6
0.0016
Cb medulloblastoma
CAAGCAAAAC (
10
)
4.6
0.0046
Cb medulloblastoma
GAAGACAGAA
(
6
)
2.3
0.0023
P8 GC+1d culture
CAAGCAAAAC (
10
)
3.4
0.0034
P8 GC+1d culture
GTGGTGCATA (
8
)
2.3
0.0023
P8 GC+1d culture
TTGTGTGATC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGTGCATA (
8
)
4.7
0.0047
P8 GC+SHH+1d culture
CAAGCAAAAC (
10
)
3.5
0.0035
P8 GC+SHH+1d culture
TTGTGTGATC
(
2
)
1.2
0.0012
3T3 fibroblasts
GTGGTGCATA (
8
)
14
0.014
3T3 fibroblasts
CAAGCAAAAC (
10
)
3.5
0.0035
E15 cortex
CCTGGTGCCT (
7
)
4.9
0.0049
P1 cortex
CAAGCAAAAC (
10
)
4.5
0.0045
P1 cortex
GTGGTGCATA (
8
)
4.5
0.0045
Hypothalamus
CAAGCAAAAC (
10
)
5.4
0.0054
Hypothalamus
GAAGACAGAA
(
6
)
1.8
0.0018
Hypothalamus
TTGTGTGATC
(
2
)
1.8
0.0018
E12.5 retina
GTGGTGCATA (
8
)
5.6
0.0056
E12.5 retina
TTGTGTGATC
(
2
)
3.8
0.0038
E14.5 retina
GTGGTGCATA (
8
)
3.6
0.0036
E14.5 retina
CCTGGTGCCT (
7
)
1.8
0.0018
E16.5 retina
GTGGTGCATA (
8
)
3.6
0.0036
E18.5 retina
GTGGTGCATA (
8
)
3.6
0.0036
E18.5 retina
CAAGCAAAAC (
10
)
1.8
0.0018
P0.5 retina
CAAGCAAAAC (
10
)
2
0.002
P0.5 retina
GTGGTGCATA (
8
)
2
0.002
P0.5 retina
TTGTGTGATC
(
2
)
2
0.002
P2.5 retina
GTGGTGCATA (
8
)
7
0.007
P2.5 retina
CAAGCAAAAC (
10
)
3.5
0.0035
P2.5 retina
GAAGACAGAA
(
6
)
1.8
0.0018
P2.5 retina
TTGTGTGATC
(
2
)
1.8
0.0018
P4.5 retina
CAAGCAAAAC (
10
)
4
0.004
P4.5 retina
GAAGACAGAA
(
6
)
2
0.002
P4.5 retina
GTGGTGCATA (
8
)
2
0.002
P6.5 retina
GTGGTGCATA (
8
)
3.3
0.0033
P6.5 retina
GAAGACAGAA
(
6
)
1.7
0.0017
P10.5 crx- retina
TTGTGTGATC
(
2
)
3.7
0.0037
P10.5 crx- retina
GTGGTGCATA (
8
)
1.9
0.0019
P10.5 crx+ retina
CCTGGTGCCT (
7
)
3.8
0.0038
P10.5 crx+ retina
GTGGTGCATA (
8
)
3.8
0.0038
P10.5 crx+ retina
CAAGCAAAAC (
10
)
1.9
0.0019
Adult retinal
GTGGTGCATA (
8
)
7.4
0.0074
Adult retinal
CCTGGTGCCT (
7
)
3.7
0.0037
Adult retinal
CAAGCAAAAC (
10
)
1.9
0.0019
Adult retinal
TTGTGTGATC
(
2
)
1.9
0.0019
ONL
CAAGCAAAAC (
10
)
9.6
0.0096
ONL
GAAGACAGAA
(
6
)
1.9
0.0019
ONL
GTGGTGCATA (
8
)
1.9
0.0019
