Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330045	4930403O06Rik	RIKEN cDNA 4930403O06 gene	1		68944
Human Homolog	LOC54499[putative membrane protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC GCCGGAGGTT (2) 9.8 0.0098 P8 Cb GC TTCTTTTACC 8.2 0.0082 P8 Cb GC GGGCGATGAG (3) 6.5 0.0065 P8 Cb GC ACAAAACTTT (5) 1.6 0.0016 P8 Cb GC TTCTTTTAAA (2) 1.6 0.0016 P8 Cb GC TTCTTTTCCC (3) 1.6 0.0016 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma GCCGGAGGTT (2) 11.6 0.0116 Cb medulloblastoma GGGCGATGAG (3) 2.3 0.0023 Cb medulloblastoma TTCTTTTAAA (2) 2.3 0.0023 Cb medulloblastoma TTCTTTTACC 2.3 0.0023 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture TTCTTTTACC 9.1 0.0091 P8 GC+1d culture GCCGGAGGTT (2) 4.6 0.0046 P8 GC+1d culture GGGCGATGAG (3) 3.4 0.0034 P8 GC+1d culture TTCTTTTAAA (2) 2.3 0.0023 P8 GC+1d culture AACATTAGGA (2) 1.1 0.0011 P8 GC+1d culture TTCTTTTCCC (3) 1.1 0.0011 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture GCCGGAGGTT (2) 16.4 0.0164 P8 GC+SHH+1d culture TTCTTTTACC 5.9 0.0059 P8 GC+SHH+1d culture GGGCGATGAG (3) 3.5 0.0035 P8 GC+SHH+1d culture TTCTTTTAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTCTTTTCCC (3) 1.2 0.0012 3T3 fibroblasts GGGCGATGAG (3) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex GGGCGATGAG (3) 9.9 0.0099 E15 cortex TTTGCAGACA (2) 9.9 0.0099 E15 cortex GCCGGAGGTT (2) 4.9 0.0049 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus ACAAAACTTT (5) 5.4 0.0054 Hypothalamus GCCGGAGGTT (2) 5.4 0.0054 Hypothalamus TTCTTTTAAA (2) 5.4 0.0054 Hypothalamus AACATTAGGA (2) 1.8 0.0018 Hypothalamus GGGCGATGAG (3) 1.8 0.0018 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina GCCGGAGGTT (2) 7.5 0.0075 E12.5 retina AACATTAGGA (2) 1.9 0.0019 E12.5 retina ACAAAACTTT (5) 1.9 0.0019 E12.5 retina TTCTTTTAAA (2) 1.9 0.0019 E12.5 retina TTCTTTTACC 1.9 0.0019 E12.5 retina TTTGCAGACA (2) 1.9 0.0019 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina TTCTTTTACC 5.5 0.0055 E14.5 retina GCCGGAGGTT (2) 1.8 0.0018 E14.5 retina TTCTTTTAAA (2) 1.8 0.0018 E14.5 retina TTTGCAGACA (2) 1.8 0.0018 E16.5 retina GCCGGAGGTT (2) 10.9 0.0109 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina TTCTTTTACC 5.4 0.0054 E16.5 retina ACAAAACTTT (5) 1.8 0.0018 E16.5 retina TTCTTTTAAA (2) 1.8 0.0018 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 E18.5 retina TTCTTTTACC 7.3 0.0073 E18.5 retina GCCGGAGGTT (2) 5.5 0.0055 E18.5 retina GGGCGATGAG (3) 5.5 0.0055 E18.5 retina TTCTTTTAAA (2) 5.5 0.0055 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina GCCGGAGGTT (2) 7.9 0.0079 P0.5 retina ACAAAACTTT (5) 2 0.002 P0.5 retina TTCTTTTACC 2 0.002 P2.5 retina GCCGGAGGTT (2) 8.8 0.0088 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina TTCTTTTACC 3.5 0.0035 P2.5 retina ACAAAACTTT (5) 1.8 0.0018 P2.5 retina TTCTTTTAAA (2) 1.8 0.0018 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina GCCGGAGGTT (2) 4 0.004 P4.5 retina TTCTTTTACC 4 0.004 P4.5 retina GGGCGATGAG (3) 2 0.002 P4.5 retina TTCTTTTAAA (2) 2 0.002 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina GCCGGAGGTT (2) 5 0.005 P6.5 retina GGGCGATGAG (3) 1.7 0.0017 P6.5 retina TTCTTTTAAA (2) 1.7 0.0017 P6.5 retina TTCTTTTACC 1.7 0.0017 P10.5 crx- retina GCCGGAGGTT (2) 14.9 0.0149 P10.5 crx- retina AACATTAGGA (2) 5.6 0.0056 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx- retina TTCTTTTAAA (2) 1.9 0.0019 P10.5 crx+ retina GCCGGAGGTT (2) 13.5 0.0135 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 P10.5 crx+ retina GGGCGATGAG (3) 3.8 0.0038 P10.5 crx+ retina TTCTTTTACC 3.8 0.0038 Adult retinal GCCGGAGGTT (2) 5.6 0.0056 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 Adult retinal GGGCGATGAG (3) 3.7 0.0037 Adult retinal TTCTTTTACC 3.7 0.0037 Adult retinal TTCTTTTAAA (2) 1.9 0.0019 ONL GGGCGATGAG (3) 5.7 0.0057 ONL GCCGGAGGTT (2) 3.8 0.0038 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL TTCTTTTAAA (2) 1.9 0.0019 ONL TTCTTTTACC 1.9 0.0019