Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330072	Notch1	Notch gene homolog 1 (Drosophila)	2	2 A3 (2 15.0 cM)	18128
Gene Ontology	calcium ion binding | cell differentiation | cell fate specification | compartment specification | determination of left/right symmetry | development | DNA binding | endoderm development | extracellular space | heart development | integral to membrane | keratinocyte differentiation | membrane | N signaling pathway | positive regulation of apoptosis | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | regulation of development | regulation of transcription, DNA-dependent | somatic stem cell renewal | transcription factor activity
Human Homolog	NOTCH1[Notch homolog 1, translocation-associated (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAACTGTA (2) CCCTGAGTGT 6.5 0.0065 P8 GC+1d culture CAAAACTGTA (2) CCCTGAGTGT GGACAGACAC (2) 5.7 0.0057 P8 GC+SHH+1d culture CAAAACTGTA (2) TAGTTTTTTT (2) 4.7 0.0047 P1 cortex CAAAACTGTA (2) GGACAGACAC (2) 9 0.009 Hypothalamus GGACAGACAC (2) 3.6 0.0036 E12.5 retina CAAAACTGTA (2) 16.9 0.0169 E14.5 retina CAAAACTGTA (2) TAGTTTTTTT (2) 21.8 0.0218 E16.5 retina CAAAACTGTA (2) 19.9 0.0199 E18.5 retina CAAAACTGTA (2) CCCTGAGTGT 32.7 0.0327 P0.5 retina CAAAACTGTA (2) GGACAGACAC (2) 25.6 0.0256 P2.5 retina CAAAACTGTA (2) 45.8 0.0458 P4.5 retina CAAAACTGTA (2) 57.5 0.0575 P6.5 retina CAAAACTGTA (2) GGACAGACAC (2) 13.4 0.0134 P10.5 crx- retina CAAAACTGTA (2) GGACAGACAC (2) 9.3 0.0093 P10.5 crx+ retina CAAAACTGTA (2) GGACAGACAC (2) 3.8 0.0038 Adult retinal GGACAGACAC (2) 3.7 0.0037 ONL CAAAACTGTA (2) 3.8 0.0038