Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330160	Hspa5	heat shock 70kD protein 5 (glucose-regulated protein)	2	2 22.5 cM	14828
Gene Ontology	ATP binding | endoplasmic reticulum | protein binding | protein folding | response to ER-overload | response to unfolded protein | ribosome binding
Human Homolog	HSPA5[heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 210 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTGTAGGA 101.1 0.1011 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC AGCCTACAGA (5) 3.3 0.0033 P8 Cb GC TGGCCTCACT (2) 3.3 0.0033 P8 Cb GC ACCAAACTGA (6) 1.6 0.0016 P8 Cb GC ACTGAAGTTC (4) 1.6 0.0016 P8 Cb GC CAGTGGTGAA (5) 1.6 0.0016 P8 Cb GC GAACACTTCA (3) 1.6 0.0016 P8 Cb GC GAAGCCTGTC (4) 1.6 0.0016 P8 Cb GC TCTTGGGGTC (2) 1.6 0.0016 P8 Cb GC TGAAGAATAC (5) 1.6 0.0016 P8 Cb GC TGCCCAGGGA (7) 1.6 0.0016 P8 Cb GC TTCTGGTGGT (6) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma TGGTGTAGGA 34.7 0.0347 Cb medulloblastoma AGCCTACAGA (5) 6.9 0.0069 Cb medulloblastoma AAGCCTGTCA (2) 2.3 0.0023 Cb medulloblastoma ACTCCTCCCA (4) 2.3 0.0023 Cb medulloblastoma GAACACTGTG (4) 2.3 0.0023 Cb medulloblastoma GGATGCTGTC (8) 2.3 0.0023 Cb medulloblastoma GGTGTCTTTT (2) 2.3 0.0023 Cb medulloblastoma TCTTGGGGTC (2) 2.3 0.0023 P8 GC+1d culture TGGTGTAGGA 68.5 0.0685 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGAAGAATAC (5) 8 0.008 P8 GC+1d culture GAACACTGTG (4) 2.3 0.0023 P8 GC+1d culture GGTGTCTTTT (2) 2.3 0.0023 P8 GC+1d culture TGCCCAGGGA (7) 2.3 0.0023 P8 GC+1d culture ACCAAACTGA (6) 1.1 0.0011 P8 GC+1d culture ACTCCTCCCA (4) 1.1 0.0011 P8 GC+1d culture CAGTGGTGAA (5) 1.1 0.0011 P8 GC+1d culture CAGTTGTTAC (4) 1.1 0.0011 P8 GC+1d culture GAAAAAGTGG (7) 1.1 0.0011 P8 GC+1d culture GACACTTCAT 1.1 0.0011 P8 GC+1d culture TCTTGGGGTC (2) 1.1 0.0011 P8 GC+1d culture TGAGCAACTG (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TGGTGTAGGA 74.9 0.0749 P8 GC+SHH+1d culture TGAAGAATAC (5) 5.9 0.0059 P8 GC+SHH+1d culture TGCCCAGGGA (7) 3.5 0.0035 P8 GC+SHH+1d culture CAGTGGTGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAGTGG (7) 2.3 0.0023 P8 GC+SHH+1d culture GGATGCTGTC (8) 2.3 0.0023 P8 GC+SHH+1d culture GGTGTCTTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCCTGTCA (2) 1.2 0.0012 P8 GC+SHH+1d culture ACCAAACTGA (6) 1.2 0.0012 P8 GC+SHH+1d culture AGCCTAAGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture AGCCTACAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture AGCTACACAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAGCTG (4) 1.2 0.0012 P8 GC+SHH+1d culture GAACACTGTG (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTTGGGGTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCTGGTGGT (6) 1.2 0.0012 3T3 fibroblasts TGGTGTAGGA 31.5 0.0315 3T3 fibroblasts ACTCCTCCCA (4) 3.5 0.0035 3T3 fibroblasts GAAAAAGTGG (7) 3.5 0.0035 3T3 fibroblasts GAACACTGTG (4) 3.5 0.0035 3T3 fibroblasts GAACACTTCA (3) 3.5 0.0035 3T3 fibroblasts GCCTGGATAA (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex ACCAAACTGA (6) 4.9 0.0049 E15 cortex ACTGAAGTTC (4) 4.9 0.0049 E15 cortex AGCCTACAGA (5) 4.9 0.0049 E15 cortex CAGTGGTGAA (5) 4.9 0.0049 E15 cortex GAAAAAGCTG (4) 4.9 0.0049 E15 cortex GGATGCTGTC (8) 4.9 0.0049 E15 cortex GGTGTCTTTT (2) 4.9 0.0049 E15 cortex TGCCCAGGGA (7) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GAAAAAGTGG (7) 9.1 0.0091 P1 cortex AAGCTGTCAG (2) 4.5 0.0045 P1 cortex TGAAGAATAC (5) 4.5 0.0045 P1 cortex TGCCCAGGGA (7) 4.5 0.0045 P1 cortex TGGTGTAGGA 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGGTGTAGGA 30.8 0.0308 Hypothalamus AGCCTACAGA (5) 5.4 0.0054 Hypothalamus CAGTGGTGAA (5) 3.6 0.0036 Hypothalamus AGCCTAAGAG (3) 1.8 0.0018 Hypothalamus GAAAAAGCTG (4) 1.8 0.0018 Hypothalamus GAAAAAGTGG (7) 1.8 0.0018 Hypothalamus GCCTGGATAA (3) 1.8 0.0018 Hypothalamus GGTGTCTTTT (2) 1.8 0.0018 Hypothalamus TGCCCAGGGA (7) 1.8 0.0018 Hypothalamus TTCTGGTGGT (6) 1.8 0.0018 E12.5 retina TGGTGTAGGA 80.7 0.0807 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AGCCTACAGA (5) 7.5 0.0075 E12.5 retina GAACACTTCA (3) 5.6 0.0056 E12.5 retina GGTGTCTTTT (2) 5.6 0.0056 E12.5 retina TGCCCAGGGA (7) 5.6 0.0056 E12.5 retina ACCAAACTGA (6) 3.8 0.0038 E12.5 retina GAACACTGTG (4) 3.8 0.0038 E12.5 retina CAGTTGTTAC (4) 1.9 0.0019 E12.5 retina GAAAAAGCTG (4) 1.9 0.0019 E12.5 retina GACACTTCAT 1.9 0.0019 E12.5 retina TGAAGAATAC (5) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TGGTGTAGGA 29.2 0.0292 E14.5 retina GAAAAAGTGG (7) 12.8 0.0128 E14.5 retina TGAAGAATAC (5) 5.5 0.0055 E14.5 retina ACCAAACTGA (6) 3.6 0.0036 E14.5 retina GGTGTCTTTT (2) 1.8 0.0018 E14.5 retina TCTTGGGGTC (2) 1.8 0.0018 E14.5 retina TGCCCAGGGA (7) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGGTGTAGGA 23.5 0.0235 E16.5 retina TGAAGAATAC (5) 10.9 0.0109 E16.5 retina ACCAAACTGA (6) 3.6 0.0036 E16.5 retina AGCCTACAGA (5) 3.6 0.0036 E16.5 retina CAGTGGTGAA (5) 3.6 0.0036 E16.5 retina GAAAAAGCTG (4) 1.8 0.0018 E16.5 retina GAAAAAGTGG (7) 1.8 0.0018 E16.5 retina GGTGTCTTTT (2) 1.8 0.0018 E16.5 retina TCTTGGGGTC (2) 1.8 0.0018 E16.5 retina TGAGCAACTG (2) 1.8 0.0018 E16.5 retina TGCCCAGGGA (7) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina TGGTGTAGGA 30.9 0.0309 E18.5 retina GATGCCCCCC (6) 25.5 0.0255 E18.5 retina TGAAGAATAC (5) 14.6 0.0146 E18.5 retina GAAAAAGTGG (7) 3.6 0.0036 E18.5 retina GGTGTCTTTT (2) 3.6 0.0036 E18.5 retina GCACAAATTT (2) 1.8 0.0018 E18.5 retina TGAGCAACTG (2) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGGTGTAGGA 23.6 0.0236 P0.5 retina TGCCCAGGGA (7) 5.9 0.0059 P0.5 retina AGCCTACAGA (5) 3.9 0.0039 P0.5 retina CAGTGGTGAA (5) 3.9 0.0039 P0.5 retina TGGCCTCACT (2) 3.9 0.0039 P0.5 retina ACCAAACTGA (6) 2 0.002 P0.5 retina GACACTTCAT 2 0.002 P0.5 retina TGAAGAATAC (5) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina TGGTGTAGGA 52.8 0.0528 P2.5 retina TGAAGAATAC (5) 24.6 0.0246 P2.5 retina GGTGTCTTTT (2) 7 0.007 P2.5 retina AGCTACACAG (5) 3.5 0.0035 P2.5 retina GAAAAAGTGG (7) 3.5 0.0035 P2.5 retina GCCTGGATAA (3) 3.5 0.0035 P2.5 retina ACTGAAGTTC (4) 1.8 0.0018 P2.5 retina CAGTGGTGAA (5) 1.8 0.0018 P2.5 retina GAAAAAGCTG (4) 1.8 0.0018 P2.5 retina GAACACTGTG (4) 1.8 0.0018 P2.5 retina TGGCCTCACT (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina TGGTGTAGGA 41.6 0.0416 P4.5 retina TGAAGAATAC (5) 27.7 0.0277 P4.5 retina GGTGTCTTTT (2) 4 0.004 P4.5 retina AGCCTACAGA (5) 2 0.002 P4.5 retina CAGTGGTGAA (5) 2 0.002 P4.5 retina GAAAAAGCTG (4) 2 0.002 P4.5 retina GAAAAAGTGG (7) 2 0.002 P4.5 retina GCACAAATTT (2) 2 0.002 P4.5 retina TGCCCAGGGA (7) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TGGTGTAGGA 40 0.04 P6.5 retina TGAAGAATAC (5) 10 0.01 P6.5 retina GAAAAAGTGG (7) 5 0.005 P6.5 retina TGCCCAGGGA (7) 5 0.005 P6.5 retina AAGCCTGTCA (2) 3.3 0.0033 P6.5 retina ACCAAACTGA (6) 1.7 0.0017 P6.5 retina CAGTGGTGAA (5) 1.7 0.0017 P6.5 retina CAGTTGTTAC (4) 1.7 0.0017 P6.5 retina GGTGTCTTTT (2) 1.7 0.0017 P10.5 crx- retina TGGTGTAGGA 20.4 0.0204 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GGACGCACTT (2) 5.6 0.0056 P10.5 crx- retina GGTGTCTTTT (2) 5.6 0.0056 P10.5 crx- retina GAACACTGTG (4) 3.7 0.0037 P10.5 crx- retina TGAAGAATAC (5) 3.7 0.0037 P10.5 crx- retina TGCCCAGGGA (7) 3.7 0.0037 P10.5 crx- retina AAGCCTGTCA (2) 1.9 0.0019 P10.5 crx- retina AAGCTGTCAG (2) 1.9 0.0019 P10.5 crx- retina CAGTGGTGAA (5) 1.9 0.0019 P10.5 crx- retina GAAAAAGTGG (7) 1.9 0.0019 P10.5 crx- retina GAAGCCTGTC (4) 1.9 0.0019 P10.5 crx- retina TGAGCAACTG (2) 1.9 0.0019 P10.5 crx+ retina TGGTGTAGGA 63.4 0.0634 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GGTGTCTTTT (2) 5.8 0.0058 P10.5 crx+ retina TGAAGAATAC (5) 5.8 0.0058 P10.5 crx+ retina TGGCCTCACT (2) 5.8 0.0058 P10.5 crx+ retina AGCCTACAGA (5) 3.8 0.0038 P10.5 crx+ retina GAAAAAGTGG (7) 1.9 0.0019 P10.5 crx+ retina GACACTTCAT 1.9 0.0019 P10.5 crx+ retina GCCTGGATAA (3) 1.9 0.0019 P10.5 crx+ retina GGACGCACTT (2) 1.9 0.0019 P10.5 crx+ retina TGAGCAACTG (2) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGGTGTAGGA 11.1 0.0111 Adult retinal CAGTGGTGAA (5) 9.3 0.0093 Adult retinal AGCCTAAGAG (3) 1.9 0.0019 Adult retinal AGCCTACAGA (5) 1.9 0.0019 Adult retinal GAACACTGTG (4) 1.9 0.0019 Adult retinal GGACGCACTT (2) 1.9 0.0019 Adult retinal GGTGTCTTTT (2) 1.9 0.0019 Adult retinal TGGCCTCACT (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TGGTGTAGGA 17.2 0.0172 ONL GGACGCACTT (2) 5.7 0.0057 ONL AAGCCTGTCA (2) 1.9 0.0019 ONL AAGCTGTCAG (2) 1.9 0.0019 ONL ACCAAACTGA (6) 1.9 0.0019 ONL AGCCTACAGA (5) 1.9 0.0019 ONL GAAAAAGTGG (7) 1.9 0.0019 ONL GAAGCCTGTC (4) 1.9 0.0019 ONL GCACAAATTT (2) 1.9 0.0019 ONL TTCTGGTGGT (6) 1.9 0.0019