Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33027
Iqsec2
IQ motif and Sec7 domain 2
X
245666
Human Homolog
IQSEC2[IQ motif and Sec7 domain 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
GGTGTTGCTA (
6
)
1.6
0.0016
Cb medulloblastoma
TGTGTTGCTA
(
2
)
6.9
0.0069
Cb medulloblastoma
GCTGGCAGGC (
3
)
2.3
0.0023
Cb medulloblastoma
GGTGTTGCTA (
6
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GCTGGCAGGC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
GGTGTTGCTA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGTTGCTA
(
2
)
1.2
0.0012
E15 cortex
CCCCCCTTCC
(
6
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TGTGTTGCTA
(
2
)
9.1
0.0091
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
E12.5 retina
GGTGTTGCTA (
6
)
11.3
0.0113
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
GGTGTTGCTA (
6
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P2.5 retina
GGTGTTGCTA (
6
)
8.8
0.0088
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
CCCCCCTTCC
(
6
)
3.5
0.0035
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
GGTGTTGCTA (
6
)
2
0.002
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GGTGTTGCTA (
6
)
5
0.005
P6.5 retina
GCTGGCAGGC (
3
)
3.3
0.0033
P10.5 crx- retina
GCTGGCAGGC (
3
)
1.9
0.0019
P10.5 crx- retina
GGTGTTGCTA (
6
)
1.9
0.0019
P10.5 crx- retina
TGTGTTGCTA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGTGTTGCTA (
6
)
13.5
0.0135
P10.5 crx+ retina
GCTGGCAGGC (
3
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
ONL
GCTGGCAGGC (
3
)
3.8
0.0038
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
