Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.330288
1190002J23Rik
RIKEN cDNA 1190002J23 gene
1
1 93.3 cM
68874
Human Homolog
KARCA1[kelch/ankyrin repeat containing cyclin A1 interacting protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 22 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTCATCG
(
2
)
TGGTTGTTGG
(
2
)
4.9
0.0049
P8 GC+1d culture
TGGTTGTTGG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTGTCATCG
(
2
)
TGGTTGTTGG
(
2
)
2.4
0.0024
E15 cortex
TGGTTGTTGG
(
2
)
4.9
0.0049
P1 cortex
TGGTTGTTGG
(
2
)
9.1
0.0091
Hypothalamus
TGGTTGTTGG
(
2
)
19.9
0.0199
E12.5 retina
TGGTTGTTGG
(
2
)
5.6
0.0056
E14.5 retina
TGGTTGTTGG
(
2
)
38.3
0.0383
E16.5 retina
TGGTTGTTGG
(
2
)
16.3
0.0163
E18.5 retina
TGGTTGTTGG
(
2
)
5.5
0.0055
P0.5 retina
CCTGTCATCG
(
2
)
2
0.002
P2.5 retina
TGGTTGTTGG
(
2
)
7
0.007
P4.5 retina
CCTGTCATCG
(
2
)
TGGTTGTTGG
(
2
)
13.9
0.0139
P6.5 retina
TGGTTGTTGG
(
2
)
5
0.005
P10.5 crx- retina
TGGTTGTTGG
(
2
)
7.4
0.0074
P10.5 crx+ retina
TGGTTGTTGG
(
2
)
3.8
0.0038
Adult retinal
CCTGTCATCG
(
2
)
TGGTTGTTGG
(
2
)
11.1
0.0111
ONL
TGGTTGTTGG
(
2
)
11.5
0.0115
