Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.330351	D430039N05Rik	RIKEN cDNA D430039N05 gene	2		241520
Gene Ontology	integral to membrane
Human Homolog	KIAA1946[KIAA1946]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTGGTGT (3) 34.3 0.0343 P8 Cb GC TAAATAAAGA (6) 26.1 0.0261 P8 Cb GC TTTTGGTGTA 6.5 0.0065 Cb medulloblastoma TTTTTGGTGT (3) 18.5 0.0185 Cb medulloblastoma TAAATAAAGA (6) 6.9 0.0069 Cb medulloblastoma AGATTTCTCT 2.3 0.0023 Cb medulloblastoma TTTTGGTGTA 2.3 0.0023 P8 GC+1d culture TTTTTGGTGT (3) 27.4 0.0274 P8 GC+1d culture TAAATAAAGA (6) 25.1 0.0251 P8 GC+1d culture TTTTGGTGTA 9.1 0.0091 P8 GC+1d culture CACCTTGAGT 6.8 0.0068 P8 GC+SHH+1d culture TTTTTGGTGT (3) 31.6 0.0316 P8 GC+SHH+1d culture TAAATAAAGA (6) 18.7 0.0187 P8 GC+SHH+1d culture CACCTTGAGT 5.9 0.0059 P8 GC+SHH+1d culture TTTTGGTGTA 3.5 0.0035 P8 GC+SHH+1d culture CTGCAATATG (2) 1.2 0.0012 3T3 fibroblasts CACCTTGAGT 10.5 0.0105 3T3 fibroblasts TTTTTGGTGT (3) 3.5 0.0035 E15 cortex GGCGGGAAGC (3) 9.9 0.0099 E15 cortex GATAAAGCCA (5) 4.9 0.0049 P1 cortex TAAATAAAGA (6) 18.2 0.0182 P1 cortex TTTTTGGTGT (3) 13.6 0.0136 P1 cortex CACCTTGAGT 9.1 0.0091 Hypothalamus TTTTTGGTGT (3) 29 0.029 Hypothalamus TTTTGGTGTA 9.1 0.0091 Hypothalamus TAAATAAAGA (6) 7.2 0.0072 Hypothalamus GGCGGGAAGC (3) 5.4 0.0054 Hypothalamus CACCTTGAGT 1.8 0.0018 Hypothalamus CTGCAATATG (2) 1.8 0.0018 E12.5 retina TTTTTGGTGT (3) 22.5 0.0225 E12.5 retina TAAATAAAGA (6) 18.8 0.0188 E12.5 retina CACCTTGAGT 3.8 0.0038 E12.5 retina TTTTGGTGTA 3.8 0.0038 E14.5 retina TTTTTGGTGT (3) 36.4 0.0364 E14.5 retina TAAATAAAGA (6) 18.2 0.0182 E14.5 retina CACCTTGAGT 9.1 0.0091 E14.5 retina CTGCAATATG (2) 1.8 0.0018 E14.5 retina TTTTGGTGTA 1.8 0.0018 E16.5 retina TTTTTGGTGT (3) 25.4 0.0254 E16.5 retina TAAATAAAGA (6) 21.7 0.0217 E16.5 retina CACCTTGAGT 5.4 0.0054 E16.5 retina TTTTGGTGTA 3.6 0.0036 E16.5 retina CTGCAATATG (2) 1.8 0.0018 E18.5 retina TAAATAAAGA (6) 25.5 0.0255 E18.5 retina TTTTTGGTGT (3) 21.8 0.0218 E18.5 retina CACCTTGAGT 1.8 0.0018 E18.5 retina TTTTGGTGTA 1.8 0.0018 P0.5 retina TTTTTGGTGT (3) 33.4 0.0334 P0.5 retina CACCTTGAGT 7.9 0.0079 P0.5 retina GATAAAGCCA (5) 2 0.002 P0.5 retina TAAATAAAGA (6) 2 0.002 P0.5 retina TTTTGGTGTA 2 0.002 P2.5 retina TTTTTGGTGT (3) 33.4 0.0334 P2.5 retina TAAATAAAGA (6) 26.4 0.0264 P2.5 retina CACCTTGAGT 10.6 0.0106 P2.5 retina GATAAAGCCA (5) 3.5 0.0035 P2.5 retina AGATTTCTCT 1.8 0.0018 P2.5 retina GGCGGGAAGC (3) 1.8 0.0018 P2.5 retina TTTTGGTGTA 1.8 0.0018 P4.5 retina TAAATAAAGA (6) 47.6 0.0476 P4.5 retina TTTTTGGTGT (3) 45.6 0.0456 P4.5 retina CACCTTGAGT 11.9 0.0119 P4.5 retina TTTTGGTGTA 4 0.004 P6.5 retina TAAATAAAGA (6) 36.7 0.0367 P6.5 retina TTTTTGGTGT (3) 35 0.035 P6.5 retina CACCTTGAGT 11.7 0.0117 P6.5 retina CTGCAATATG (2) 3.3 0.0033 P6.5 retina AGATTTCTCT 1.7 0.0017 P6.5 retina GATAAAGCCA (5) 1.7 0.0017 P6.5 retina GGCGGGAAGC (3) 1.7 0.0017 P6.5 retina TTTTGGTGTA 1.7 0.0017 P10.5 crx- retina TTTTTGGTGT (3) 39 0.039 P10.5 crx- retina TTTTGGTGTA 11.1 0.0111 P10.5 crx- retina TAAATAAAGA (6) 9.3 0.0093 P10.5 crx- retina CACCTTGAGT 5.6 0.0056 P10.5 crx+ retina TTTTTGGTGT (3) 26.9 0.0269 P10.5 crx+ retina TTTTGGTGTA 7.7 0.0077 P10.5 crx+ retina CACCTTGAGT 5.8 0.0058 P10.5 crx+ retina TAAATAAAGA (6) 3.8 0.0038 P10.5 crx+ retina CTGCAATATG (2) 1.9 0.0019 Adult retinal TTTTTGGTGT (3) 24.1 0.0241 Adult retinal CACCTTGAGT 9.3 0.0093 Adult retinal GGCGGGAAGC (3) 3.7 0.0037 Adult retinal TTTTGGTGTA 3.7 0.0037 Adult retinal TAAATAAAGA (6) 1.9 0.0019 ONL TAAATAAAGA (6) 13.4 0.0134 ONL TTTTGGTGTA 11.5 0.0115 ONL TTTTTGGTGT (3) 11.5 0.0115 ONL AGATTTCTCT 1.9 0.0019 ONL CACCTTGAGT 1.9 0.0019