Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.330492
1200015F23Rik
RIKEN cDNA 1200015F23 gene
2
67809
Human Homolog
FLJ10579[hypothetical protein FLJ10579]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 55 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCTGGTG (
10
)
22.8
0.0228
P8 Cb GC
GACTGGAGAC
4.9
0.0049
P8 Cb GC
GAGTTCAGGA
(
5
)
3.3
0.0033
Cb medulloblastoma
GACTGGAGAC
9.2
0.0092
Cb medulloblastoma
GTGGCTGGTG (
10
)
6.9
0.0069
Cb medulloblastoma
TGGACAAAGC
(
6
)
4.6
0.0046
P8 GC+1d culture
GTGGCTGGTG (
10
)
14.8
0.0148
P8 GC+1d culture
GACTGGAGAC
3.4
0.0034
P8 GC+SHH+1d culture
GTGGCTGGTG (
10
)
17.6
0.0176
P8 GC+SHH+1d culture
GACTGGAGAC
2.3
0.0023
P8 GC+SHH+1d culture
TTGAGCAAAG (
4
)
1.2
0.0012
3T3 fibroblasts
GTGGCTGGTG (
10
)
21
0.021
E15 cortex
GTGGCTGGTG (
10
)
14.8
0.0148
E15 cortex
CCAACAGGGT (
4
)
4.9
0.0049
E15 cortex
TTGAGCAAAG (
4
)
4.9
0.0049
P1 cortex
GTGGCTGGTG (
10
)
9.1
0.0091
P1 cortex
TGGACAAAGC
(
6
)
4.5
0.0045
P1 cortex
TTGAGCAAAG (
4
)
4.5
0.0045
Hypothalamus
GTGGCTGGTG (
10
)
12.7
0.0127
Hypothalamus
GACTGGAGAC
5.4
0.0054
Hypothalamus
TTGAATATTA
1.8
0.0018
E12.5 retina
GTGGCTGGTG (
10
)
22.5
0.0225
E12.5 retina
CCAACAGGGT (
4
)
1.9
0.0019
E14.5 retina
GTGGCTGGTG (
10
)
21.9
0.0219
E14.5 retina
GACTGGAGAC
3.6
0.0036
E14.5 retina
CCAACAGGGT (
4
)
1.8
0.0018
E14.5 retina
TTGAATATTA
1.8
0.0018
E16.5 retina
GTGGCTGGTG (
10
)
23.5
0.0235
E16.5 retina
CCAACAGGGT (
4
)
3.6
0.0036
E16.5 retina
TATAATAATA (
4
)
3.6
0.0036
E18.5 retina
GTGGCTGGTG (
10
)
21.8
0.0218
E18.5 retina
GACTGGAGAC
1.8
0.0018
P0.5 retina
GTGGCTGGTG (
10
)
17.7
0.0177
P0.5 retina
GACTGGAGAC
2
0.002
P2.5 retina
GTGGCTGGTG (
10
)
21.1
0.0211
P4.5 retina
GTGGCTGGTG (
10
)
21.8
0.0218
P4.5 retina
GACTGGAGAC
9.9
0.0099
P4.5 retina
TTGAATATTA
2
0.002
P6.5 retina
GTGGCTGGTG (
10
)
15
0.015
P6.5 retina
TTGAGCAAAG (
4
)
5
0.005
P6.5 retina
CCAACAGGGT (
4
)
1.7
0.0017
P6.5 retina
TATAATAATA (
4
)
1.7
0.0017
P10.5 crx- retina
GTGGCTGGTG (
10
)
5.6
0.0056
P10.5 crx- retina
GACTGGAGAC
3.7
0.0037
P10.5 crx- retina
GGGAAAGTGA (
4
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTGGTG (
10
)
13.5
0.0135
P10.5 crx+ retina
GACTGGAGAC
7.7
0.0077
P10.5 crx+ retina
GGGAAAGTGA (
4
)
3.8
0.0038
Adult retinal
GACTGGAGAC
16.7
0.0167
Adult retinal
GTGGCTGGTG (
10
)
11.1
0.0111
Adult retinal
CCAACAGGGT (
4
)
1.9
0.0019
Adult retinal
TTGAGCAAAG (
4
)
1.9
0.0019
ONL
GACTGGAGAC
11.5
0.0115
ONL
GTGGCTGGTG (
10
)
9.6
0.0096
ONL
GAGTTCAGGA
(
5
)
1.9
0.0019
