| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACACCATAGA (2) CAGATCTTTG (2) GCCGGCAGCC (2) TCAGATCTTT (2)
| 50.6 | 0.0506 |
| Cb medulloblastoma | ACACCATAGA (2) CAGATCTTTG (2) CCACCTCTGA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | CAGATCTTTG (2) CCACCTCTGA (2) TCAGATCTTT (2)
| 49.1 | 0.0491 |
| P8 GC+SHH+1d culture | CAGATCTTTG (2) CAGATTTTTC (2) GCCGGCAGCC (2) TCAGATCTTT (2)
| 46.9 | 0.0469 |
| 3T3 fibroblasts | CAGATCTTTG (2) CCACCTCTGA (2)
| 10.5 | 0.0105 |
| E15 cortex | CAGATCTTTG (2) TGACCTCGGG (2)
| 29.6 | 0.0296 |
| P1 cortex | CAGATCTTTG (2)
| 40.9 | 0.0409 |
| Hypothalamus | CAGATCTTTG (2) CCACCTCTGA (2) GCCGGCAGCC (2) TGACCTCGGG (2)
| 21.7 | 0.0217 |
| E12.5 retina | CAGATCTTTG (2) TGACCTCGGG (2)
| 28.2 | 0.0282 |
| E14.5 retina | CAGATCTTTG (2) GCCGGCAGCC (2) TCAGATCTTT (2) TGACCTCGGG (2)
| 16.3 | 0.0163 |
| E16.5 retina | CAGATCTTTG (2) CCACCTCTGA (2)
| 27.1 | 0.0271 |
| E18.5 retina | CAGATCTTTG (2) TGACCTCGGG (2)
| 14.5 | 0.0145 |
| P0.5 retina | CAGATCTTTG (2)
| 35.3 | 0.0353 |
| P2.5 retina | CAGATCTTTG (2)
| 26.4 | 0.0264 |
| P4.5 retina | CAGATCTTTG (2)
| 7.9 | 0.0079 |
| P6.5 retina | CAGATCTTTG (2)
| 23.3 | 0.0233 |
| P10.5 crx- retina | CAGATCTTTG (2) CCACCTCTGA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | CAGATCTTTG (2) TGACCTCGGG (2)
| 11.5 | 0.0115 |
| Adult retinal | CAGATCTTTG (2) CAGATTTTTC (2) TGACCTCGGG (2)
| 29.7 | 0.0297 |
| ONL | ACACCATAGA (2) CAGATCTTTG (2) CAGATTTTTC (2)
| 23 | 0.023 |