Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.331156
Trim46
tripartite motif protein 46
3
360213
Human Homolog
TRIM46[tripartite motif-containing 46]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGTCATTTG (
2
)
50.6
0.0506
P8 Cb GC
GTTTATAAAC
(
2
)
1.6
0.0016
Cb medulloblastoma
CTGTCATTTG (
2
)
13.9
0.0139
Cb medulloblastoma
GAGAAGGAAC (
10
)
2.3
0.0023
Cb medulloblastoma
GTTTATAAAC
(
2
)
2.3
0.0023
Cb medulloblastoma
TCTCTGACCC (
4
)
2.3
0.0023
P8 GC+1d culture
CTGTCATTTG (
2
)
20.5
0.0205
P8 GC+1d culture
GAGAAGGAAC (
10
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGTCATTTG (
2
)
53.9
0.0539
P8 GC+SHH+1d culture
GTTTATAAAC
(
2
)
4.7
0.0047
P8 GC+SHH+1d culture
GAGAAGGAAC (
10
)
3.5
0.0035
P8 GC+SHH+1d culture
TCTCTGACCC (
4
)
1.2
0.0012
3T3 fibroblasts
CTGTCATTTG (
2
)
14
0.014
3T3 fibroblasts
GAGAAGGAAC (
10
)
3.5
0.0035
3T3 fibroblasts
TCTCTGACCC (
4
)
3.5
0.0035
E15 cortex
CTGTCATTTG (
2
)
19.8
0.0198
P1 cortex
GTTTATAAAC
(
2
)
13.6
0.0136
P1 cortex
TCTCTGACCC (
4
)
9.1
0.0091
Hypothalamus
GTTTATAAAC
(
2
)
5.4
0.0054
Hypothalamus
CTGTCATTTG (
2
)
1.8
0.0018
Hypothalamus
TCTCTGACCC (
4
)
1.8
0.0018
E12.5 retina
CTGTCATTTG (
2
)
50.7
0.0507
E12.5 retina
GAGAAGGAAC (
10
)
1.9
0.0019
E12.5 retina
GTTTATAAAC
(
2
)
1.9
0.0019
E14.5 retina
CTGTCATTTG (
2
)
60.1
0.0601
E14.5 retina
TCTCTGACCC (
4
)
1.8
0.0018
E16.5 retina
CTGTCATTTG (
2
)
59.8
0.0598
E16.5 retina
GAGAAGGAAC (
10
)
5.4
0.0054
E16.5 retina
GTTTATAAAC
(
2
)
1.8
0.0018
E18.5 retina
CTGTCATTTG (
2
)
67.3
0.0673
E18.5 retina
GTTTATAAAC
(
2
)
3.6
0.0036
P0.5 retina
CTGTCATTTG (
2
)
64.8
0.0648
P2.5 retina
CTGTCATTTG (
2
)
47.5
0.0475
P2.5 retina
GTTTATAAAC
(
2
)
5.3
0.0053
P4.5 retina
CTGTCATTTG (
2
)
39.6
0.0396
P4.5 retina
GAGAAGGAAC (
10
)
2
0.002
P6.5 retina
CTGTCATTTG (
2
)
43.4
0.0434
P6.5 retina
GAGAAGGAAC (
10
)
3.3
0.0033
P10.5 crx- retina
CTGTCATTTG (
2
)
33.4
0.0334
P10.5 crx- retina
GAGAAGGAAC (
10
)
3.7
0.0037
P10.5 crx- retina
TCTCTGACCC (
4
)
3.7
0.0037
P10.5 crx- retina
GTTTATAAAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
CTGTCATTTG (
2
)
21.1
0.0211
P10.5 crx+ retina
GAGAAGGAAC (
10
)
3.8
0.0038
P10.5 crx+ retina
GTTTATAAAC
(
2
)
3.8
0.0038
Adult retinal
CTGTCATTTG (
2
)
22.2
0.0222
Adult retinal
GAGAAGGAAC (
10
)
1.9
0.0019
Adult retinal
TCTCTGACCC (
4
)
1.9
0.0019
ONL
CTGTCATTTG (
2
)
11.5
0.0115
ONL
GAGAAGGAAC (
10
)
1.9
0.0019
