Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331182	Snapap	SNAP-associated protein	3		20615
Gene Ontology	cytosol | exocytosis | protein binding | SNARE binding | synapse | synaptic vesicle exocytosis | synaptosome
Human Homolog	SNAPAP[SNAP-associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGACTCACA (25) 14.7 0.0147 P8 Cb GC TCCTGAACCC (4) 13.1 0.0131 P8 Cb GC CACTGAGCTC (4) 1.6 0.0016 Cb medulloblastoma GTGACTCACA (25) 25.4 0.0254 Cb medulloblastoma CACTGAGCTC (4) 4.6 0.0046 P8 GC+1d culture GTGACTCACA (25) 14.8 0.0148 P8 GC+1d culture TCCTGAACCC (4) 10.3 0.0103 P8 GC+1d culture GTGACTTACA (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGACTCACA (25) 16.4 0.0164 P8 GC+SHH+1d culture TCCTGAACCC (4) 5.9 0.0059 P8 GC+SHH+1d culture CACTGAGCTC (4) 2.3 0.0023 P8 GC+SHH+1d culture CCAGATAGCG 1.2 0.0012 3T3 fibroblasts GTGACTCACA (25) 35 0.035 3T3 fibroblasts GGGGGGTGGG (10) 3.5 0.0035 3T3 fibroblasts GTGACTTACA (3) 3.5 0.0035 E15 cortex GTGACTCACA (25) 19.8 0.0198 E15 cortex TCCTGAACCC (4) 4.9 0.0049 P1 cortex GTGACTCACA (25) 13.6 0.0136 P1 cortex TCCTGAACCC (4) 13.6 0.0136 P1 cortex GGGGGGTGGG (10) 4.5 0.0045 Hypothalamus GTGACTCACA (25) 21.7 0.0217 Hypothalamus TCCTGAACCC (4) 7.2 0.0072 Hypothalamus CACTGAGCTC (4) 1.8 0.0018 Hypothalamus CCAGATAGCG 1.8 0.0018 E12.5 retina GTGACTCACA (25) 35.7 0.0357 E12.5 retina TCCTGAACCC (4) 9.4 0.0094 E12.5 retina CACTGAGCTC (4) 3.8 0.0038 E12.5 retina GTGACTTACA (3) 1.9 0.0019 E14.5 retina GTGACTCACA (25) 45.5 0.0455 E14.5 retina TCCTGAACCC (4) 16.4 0.0164 E14.5 retina GTGACTTACA (3) 1.8 0.0018 E16.5 retina GTGACTCACA (25) 29 0.029 E16.5 retina TCCTGAACCC (4) 14.5 0.0145 E16.5 retina CACTGAGCTC (4) 1.8 0.0018 E18.5 retina TCCTGAACCC (4) 32.7 0.0327 E18.5 retina GTGACTCACA (25) 27.3 0.0273 P0.5 retina GTGACTCACA (25) 29.4 0.0294 P0.5 retina TCCTGAACCC (4) 7.9 0.0079 P2.5 retina GTGACTCACA (25) 24.6 0.0246 P2.5 retina TCCTGAACCC (4) 15.8 0.0158 P2.5 retina CACTGAGCTC (4) 5.3 0.0053 P4.5 retina GTGACTCACA (25) 27.7 0.0277 P4.5 retina TCCTGAACCC (4) 7.9 0.0079 P4.5 retina CACTGAGCTC (4) 2 0.002 P4.5 retina CCAGATAGCG 2 0.002 P6.5 retina GTGACTCACA (25) 26.7 0.0267 P6.5 retina TCCTGAACCC (4) 10 0.01 P6.5 retina CACTGAGCTC (4) 1.7 0.0017 P6.5 retina CCAGATAGCG 1.7 0.0017 P6.5 retina GGGGGGTGGG (10) 1.7 0.0017 P10.5 crx- retina GTGACTCACA (25) 26 0.026 P10.5 crx- retina TCCTGAACCC (4) 5.6 0.0056 P10.5 crx+ retina GTGACTCACA (25) 30.8 0.0308 P10.5 crx+ retina TCCTGAACCC (4) 3.8 0.0038 P10.5 crx+ retina CACTGAGCTC (4) 1.9 0.0019 P10.5 crx+ retina CCAGATAGCG 1.9 0.0019 Adult retinal GTGACTCACA (25) 33.3 0.0333 Adult retinal CACTGAGCTC (4) 1.9 0.0019 Adult retinal TCCTGAACCC (4) 1.9 0.0019 ONL GTGACTCACA (25) 34.5 0.0345 ONL TCCTGAACCC (4) 3.8 0.0038 ONL GGGGGGTGGG (10) 1.9 0.0019 ONL GTGACTTACA (3) 1.9 0.0019