Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331929	3110001B12Rik	RIKEN cDNA 3110001B12 gene	4		70353
Mm.331929	AI115522	expressed sequence AI115522	4		100032
Mm.331929	Phactr4	phosphatase and actin regulator 4	4		100169
Human Homolog	PHACTR4[phosphatase and actin regulator 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 74 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGAAGC (2) CCTTTAATCC (3) GACAGTGTGG (4) TTAAGATGCT (3) 57 0.057 Cb medulloblastoma CAGTGGAAAG CCTTTAATCC (3) 43.9 0.0439 P8 GC+1d culture CCTTTAATCC (3) GACAGTGTGG (4) TTAAGATGCT (3) 37.7 0.0377 P8 GC+SHH+1d culture CCTTTAATCC (3) CTGCTTCGTT GACAGTGTGG (4) TTAAGATGCT (3) 30.5 0.0305 3T3 fibroblasts AAGCTGAAGC (2) CAGTGGAAAG CCTTTAATCC (3) 77.1 0.0771 E15 cortex CCTTTAATCC (3) TTAAGATGCT (3) 59.3 0.0593 P1 cortex CCTTTAATCC (3) CTGCTTCGTT 159 0.159 Hypothalamus AAGCTGAAGC (2) CAGTGGAAAG CCTTTAATCC (3) GACAGTGTGG (4) TTAAGATGCT (3) 27.1 0.0271 E12.5 retina AAGCTGAAGC (2) CAGTGGAAAG CCTTTAATCC (3) GACAGTGTGG (4) TTAAGATGCT (3) 84.6 0.0846 E14.5 retina CCTTTAATCC (3) CTGCTTCGTT GACAGTGTGG (4) TTAAGATGCT (3) 131.2 0.1312 E16.5 retina CCTTTAATCC (3) CTGCTTCGTT TTAAGATGCT (3) 72.4 0.0724 E18.5 retina CCTTTAATCC (3) CTGCTTCGTT GACAGTGTGG (4) GTAGTGTTTC 30.8 0.0308 P0.5 retina CCTTTAATCC (3) CTGCTTCGTT GACAGTGTGG (4) TTAAGATGCT (3) 80.5 0.0805 P2.5 retina CCTTTAATCC (3) TTAAGATGCT (3) 72.2 0.0722 P4.5 retina CCTTTAATCC (3) CTGCATTAAA (3) GACAGTGTGG (4) TTAAGATGCT (3) 53.5 0.0535 P6.5 retina CAGTGGAAAG CCTTTAATCC (3) CTGCTTCGTT GACAGTGTGG (4) GTAGTGTTTC TTAAGATGCT (3) 85.1 0.0851 P10.5 crx- retina CAGTGGAAAG CCTTTAATCC (3) GACAGTGTGG (4) GTAGTGTTTC TTAAGATGCT (3) 74.5 0.0745 P10.5 crx+ retina CAGTGGAAAG CCTTTAATCC (3) GACAGTGTGG (4) GTAGTGTTTC 49.9 0.0499 Adult retinal AAGCTGAAGC (2) CAGTGGAAAG CCTTTAATCC (3) GACAGTGTGG (4) GTAGTGTTTC TTAAGATGCT (3) 150.1 0.1501 ONL CAGTGGAAAG CCTTTAATCC (3) 88.1 0.0881