Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.332192
Gm440
gene model 440, (NCBI)
5
242819
Human Homolog
RPIB9[Rap2-binding protein 9]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAAAAAAAA (
2
)
ACAGACATTG
TATATTAAAG
9.7
0.0097
Cb medulloblastoma
ACAAAAAAAA (
2
)
ACAGACATTG
37
0.037
P8 GC+1d culture
ACAAAAAAAA (
2
)
5.7
0.0057
P8 GC+SHH+1d culture
ACAAAAAAAA (
2
)
ACAGACATTG
TATATTAAAG
18.8
0.0188
E15 cortex
ACAAAAAAAA (
2
)
ACAGACATTG
9.8
0.0098
P1 cortex
ACAAAAAAAA (
2
)
TATATTAAAG
9
0.009
Hypothalamus
ACAAAAAAAA (
2
)
TATATTAAAG
12.7
0.0127
E12.5 retina
ACAAAAAAAA (
2
)
1.9
0.0019
E14.5 retina
ACAAAAAAAA (
2
)
ACAGACATTG
TATATTAAAG
9.1
0.0091
E16.5 retina
ACAAAAAAAA (
2
)
ACAGACATTG
3.6
0.0036
E18.5 retina
ACAAAAAAAA (
2
)
TATATTAAAG
18.2
0.0182
P0.5 retina
ACAAAAAAAA (
2
)
CCTGCTTTGG
7.9
0.0079
P2.5 retina
ACAAAAAAAA (
2
)
ACAGACATTG
8.8
0.0088
P4.5 retina
ACAAAAAAAA (
2
)
TATATTAAAG
11.8
0.0118
P6.5 retina
ACAAAAAAAA (
2
)
CCTGCTTTGG
TATATTAAAG
8.4
0.0084
P10.5 crx- retina
ACAAAAAAAA (
2
)
1.9
0.0019
P10.5 crx+ retina
ACAAAAAAAA (
2
)
11.5
0.0115
Adult retinal
ACAGACATTG
CCTGCTTTGG
TATATTAAAG
7.5
0.0075
ONL
ACAAAAAAAA (
2
)
TATATTAAAG
7.6
0.0076
