Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.33220
Plekhm2
pleckstrin homology domain containing, family M (with RUN domain) member 2
4
69582
Mm.33220
4930451G21Rik
RIKEN cDNA 4930451G21 gene
4
73957
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
TAAGCCAAAT
(
3
)
4.9
0.0049
P8 Cb GC
AGTGCCCAGC (
3
)
3.3
0.0033
P8 Cb GC
GACTTCTACC (
3
)
3.3
0.0033
P8 Cb GC
CACAGATCCC
(
4
)
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
TAAGCCAAAT
(
3
)
9.2
0.0092
Cb medulloblastoma
AGCGTGGTGG
(
3
)
6.9
0.0069
P8 GC+1d culture
GACTTCTACC (
3
)
11.4
0.0114
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
AGCGTGGTGG
(
3
)
5.7
0.0057
P8 GC+1d culture
AGTGCCCAGC (
3
)
5.7
0.0057
P8 GC+1d culture
AAAAGATCCC (
6
)
4.6
0.0046
P8 GC+1d culture
TAAGCCAAAT
(
3
)
3.4
0.0034
P8 GC+1d culture
CACAGATCCC
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GACTTCTACC (
3
)
15.2
0.0152
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
AGCGTGGTGG
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
AGTGCCCAGC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCGTGGTGG
(
8
)
2.3
0.0023
P8 GC+SHH+1d culture
TAAGCCAAAT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGAGCAAGC (
6
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
AGCGTGGTGG
(
3
)
14
0.014
E15 cortex
CAAAGATCCT (
3
)
14.8
0.0148
E15 cortex
AGGAGCAAGC (
6
)
4.9
0.0049
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
GGCGTGGTGG
(
8
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
GACTTCTACC (
3
)
9.1
0.0091
P1 cortex
AGCGTGGTGG
(
3
)
4.5
0.0045
P1 cortex
CACAGATCCC
(
4
)
4.5
0.0045
P1 cortex
TAAGCCAAAT
(
3
)
4.5
0.0045
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
TAAGCCAAAT
(
3
)
5.4
0.0054
Hypothalamus
AGCGTGGTGG
(
3
)
3.6
0.0036
Hypothalamus
AGGAGCAAGC (
6
)
1.8
0.0018
E12.5 retina
AGCGTGGTGG
(
3
)
3.8
0.0038
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
GACTTCTACC (
3
)
1.9
0.0019
E12.5 retina
TAAGCCAAAT
(
3
)
1.9
0.0019
E12.5 retina
TCCACAGCCC
(
3
)
1.9
0.0019
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
GACTTCTACC (
3
)
9.1
0.0091
E14.5 retina
TAAGCCAAAT
(
3
)
3.6
0.0036
E14.5 retina
TCCACAGCCC
(
3
)
1.8
0.0018
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
TAAGCCAAAT
(
3
)
10.9
0.0109
E16.5 retina
GACTTCTACC (
3
)
7.2
0.0072
E16.5 retina
CACAGATCCC
(
4
)
1.8
0.0018
E16.5 retina
TCCACAGCCC
(
3
)
1.8
0.0018
E18.5 retina
TAAGCCAAAT
(
3
)
7.3
0.0073
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
GACTTCTACC (
3
)
3.6
0.0036
E18.5 retina
AGCGTGGTGG
(
3
)
1.8
0.0018
E18.5 retina
CAAAGATCCT (
3
)
1.8
0.0018
P0.5 retina
GACTTCTACC (
3
)
21.6
0.0216
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
AGGAGCAAGC (
6
)
5.9
0.0059
P0.5 retina
AGCGTGGTGG
(
3
)
3.9
0.0039
P0.5 retina
AGTGCCCAGC (
3
)
2
0.002
P0.5 retina
GGCGTGGTGG
(
8
)
2
0.002
P0.5 retina
TAAGCCAAAT
(
3
)
2
0.002
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
CAAAGATCCT (
3
)
5.3
0.0053
P2.5 retina
GACTTCTACC (
3
)
5.3
0.0053
P2.5 retina
GGCGTGGTGG
(
8
)
3.5
0.0035
P2.5 retina
AGGAGCAAGC (
6
)
1.8
0.0018
P2.5 retina
AGTGCCCAGC (
3
)
1.8
0.0018
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
GACTTCTACC (
3
)
5.9
0.0059
P4.5 retina
TAAGCCAAAT
(
3
)
5.9
0.0059
P4.5 retina
AGCGTGGTGG
(
3
)
2
0.002
P4.5 retina
CACAGATCCC
(
4
)
2
0.002
P4.5 retina
GGCGTGGTGG
(
8
)
2
0.002
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
TAAGCCAAAT
(
3
)
6.7
0.0067
P6.5 retina
GACTTCTACC (
3
)
5
0.005
P6.5 retina
AGCGTGGTGG
(
3
)
3.3
0.0033
P6.5 retina
AGGAGCAAGC (
6
)
1.7
0.0017
P6.5 retina
CACAGATCCC
(
4
)
1.7
0.0017
P10.5 crx- retina
AGCGTGGTGG
(
3
)
18.6
0.0186
P10.5 crx- retina
GACTTCTACC (
3
)
13
0.013
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
AGGAGCAAGC (
6
)
3.7
0.0037
P10.5 crx- retina
AGTGCCCAGC (
3
)
1.9
0.0019
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
GACTTCTACC (
3
)
3.8
0.0038
P10.5 crx+ retina
AAAAGATCCC (
6
)
1.9
0.0019
P10.5 crx+ retina
AGCGTGGTGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAAGCCAAAT
(
3
)
1.9
0.0019
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
AGGAGCAAGC (
6
)
13
0.013
Adult retinal
GACTTCTACC (
3
)
11.1
0.0111
Adult retinal
AGCGTGGTGG
(
3
)
3.7
0.0037
Adult retinal
AGTGCCCAGC (
3
)
3.7
0.0037
Adult retinal
GGCGTGGTGG
(
8
)
3.7
0.0037
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
AGGAGCAAGC (
6
)
3.8
0.0038
ONL
AGCGTGGTGG
(
3
)
1.9
0.0019
ONL
AGTGCCCAGC (
3
)
1.9
0.0019
ONL
GACTTCTACC (
3
)
1.9
0.0019
ONL
GGCGTGGTGG
(
8
)
1.9
0.0019
