Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332303	AL117728	expressed sequence AL117728	10		404591
Mm.332303	Ptprk	protein tyrosine phosphatase, receptor type, K	10	10 19.0 cM	19272
Gene Ontology	extracellular space | hydrolase activity | integral to membrane | membrane | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRK[protein tyrosine phosphatase, receptor type, K]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC TTTCTCATTG (2) 1.6 0.0016 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTTATAA (4) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCTGAAAGAG (6) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CCTTTATTCC (18) 27.3 0.0273 P1 cortex CCTGTGAATT (2) 4.5 0.0045 P1 cortex GTGCTTATAA (4) 4.5 0.0045 Hypothalamus ACAAACACTT (4) 1.8 0.0018 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina GTGGAAGCCC (6) 1.9 0.0019 E14.5 retina TTTCTCATTG (2) 21.9 0.0219 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina GTGCTTATAA (4) 1.8 0.0018 E14.5 retina GTGGAAGCCC (6) 1.8 0.0018 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina TTTCTCATTG (2) 1.8 0.0018 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GTGGAAGCCC (6) 3.9 0.0039 P0.5 retina CCTTTATTCC (18) 2 0.002 P0.5 retina GTGCTTATAA (4) 2 0.002 P2.5 retina CCTGTGAATT (2) 3.5 0.0035 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P2.5 retina GCTGAAAGAG (6) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina GCTGAAAGAG (6) 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGCTTATAA (4) 2 0.002 P6.5 retina CCTTTATTCC (18) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina GTGCTTATAA (4) 1.9 0.0019 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina GTGCTTATAA (4) 3.8 0.0038 P10.5 crx+ retina CCTGTGAATT (2) 1.9 0.0019 Adult retinal CCTTTATTCC (18) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTTCTCATTG (2) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ACAAACACTT (4) 1.9 0.0019 ONL CCTTTATTCC (18) 1.9 0.0019