| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGTCATATGG (2) GTAAATGCAA (3)
| 11.4 | 0.0114 |
| Cb medulloblastoma | GTAAATGCAA (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CAACAAGTAA (2) CTGTGGGATG (2) GTAAATGCAA (3) TATGTGAAAA (2)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | CTGTGGGATG (2) GTAAATGCAA (3) TATATTTTTG (3)
| 7.1 | 0.0071 |
| Hypothalamus | GTAAATGCAA (3) TGGTACAACA (2)
| 3.6 | 0.0036 |
| E12.5 retina | GTAAATGCAA (3)
| 7.5 | 0.0075 |
| E14.5 retina | GTAAATGCAA (3) GTTTCCCCTC (2) TATATTTTTG (3) TATGTGAAAA (2)
| 7.2 | 0.0072 |
| E16.5 retina | CTGTGGGATG (2) GTAAATGCAA (3) TATGTGAAAA (2)
| 5.4 | 0.0054 |
| E18.5 retina | GTTTCCCCTC (2) TATATTTTTG (3)
| 3.6 | 0.0036 |
| P0.5 retina | GTAAATGCAA (3)
| 3.9 | 0.0039 |
| P2.5 retina | CAACAAGTAA (2) GTAAATGCAA (3) TATGTGAAAA (2)
| 14.2 | 0.0142 |
| P4.5 retina | GTAAATGCAA (3)
| 9.9 | 0.0099 |
| P6.5 retina | CAACAAGTAA (2) GTAAATGCAA (3)
| 8.4 | 0.0084 |
| P10.5 crx- retina | GTAAATGCAA (3)
| 7.4 | 0.0074 |
| P10.5 crx+ retina | GTAAATGCAA (3) GTTTCCCCTC (2)
| 5.7 | 0.0057 |
| Adult retinal | CAACAAGTAA (2) GGTCATATGG (2) GTAAATGCAA (3) GTTTCCCCTC (2) TATGTGAAAA (2) TGGTACAACA (2)
| 16.8 | 0.0168 |
| ONL | CAACAAGTAA (2) CTGTGGGATG (2) GGTCATATGG (2) GTAAATGCAA (3) GTTTCCCCTC (2) TATATTTTTG (3) TATGTGAAAA (2)
| 15.2 | 0.0152 |