Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.332693	Cdk2ap1	CDK2 (cyclin-dependent kinase 2)-associated protein 1	5		13445
Gene Ontology	kinase activity | negative regulation of cell cycle
Human Homolog	CDK2AP1[CDK2-associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC GCCAAGTGGA (4) 73.4 0.0734 P8 Cb GC CAGAAGAAAG (4) 24.5 0.0245 P8 Cb GC AAGCAGGGTC (2) 4.9 0.0049 P8 Cb GC CCCGGAGCCT 3.3 0.0033 P8 Cb GC CAGACAGACA (12) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GCCAAGTGGA (4) 69.4 0.0694 Cb medulloblastoma CAGAAGAAAG (4) 13.9 0.0139 Cb medulloblastoma CAAAAAAAAG (9) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GCCAAGTGGA (4) 181.5 0.1815 P8 GC+1d culture CAGAAGAAAG (4) 49.1 0.0491 P8 GC+1d culture AAGCAGGGTC (2) 3.4 0.0034 P8 GC+1d culture CAAAAAAAAG (9) 2.3 0.0023 P8 GC+1d culture CCCGGAGCCT 2.3 0.0023 P8 GC+1d culture CAGACAGACA (12) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GCCAAGTGGA (4) 160.4 0.1604 P8 GC+SHH+1d culture CAGAAGAAAG (4) 52.7 0.0527 P8 GC+SHH+1d culture AAGCAGGGTC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGCGCGGTCA 1.2 0.0012 3T3 fibroblasts GCCAAGTGGA (4) 199.8 0.1998 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GCCAAGTGGA (4) 108.9 0.1089 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GCCAAGTGGA (4) 81.8 0.0818 P1 cortex AAGCAGGGTC (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GCCAAGTGGA (4) 43.5 0.0435 Hypothalamus TGTAACCTGT 3.6 0.0036 Hypothalamus AAGCAGGGTC (2) 1.8 0.0018 Hypothalamus CAGAAGAAAG (4) 1.8 0.0018 Hypothalamus GAGCTTCTCT 1.8 0.0018 E12.5 retina GCCAAGTGGA (4) 225.3 0.2253 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CAGAAGAAAG (4) 41.3 0.0413 E12.5 retina AAGCAGGGTC (2) 5.6 0.0056 E12.5 retina AAACAGGGTC (3) 1.9 0.0019 E12.5 retina GAGCTTCTCT 1.9 0.0019 E12.5 retina TGTAACCTGT 1.9 0.0019 E14.5 retina GCCAAGTGGA (4) 114.8 0.1148 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CAGAAGAAAG (4) 31 0.031 E14.5 retina AAGCAGGGTC (2) 3.6 0.0036 E14.5 retina TGCGCGGTCA 3.6 0.0036 E14.5 retina GAGCTTCTCT 1.8 0.0018 E16.5 retina GCCAAGTGGA (4) 217.3 0.2173 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAGAAGAAAG (4) 23.5 0.0235 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GCCAAGTGGA (4) 87.3 0.0873 E18.5 retina CAGAAGAAAG (4) 14.6 0.0146 E18.5 retina CAAAAAAAAG (9) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GCCAAGTGGA (4) 109.9 0.1099 P0.5 retina CAGAAGAAAG (4) 31.4 0.0314 P0.5 retina AAGCAGGGTC (2) 3.9 0.0039 P0.5 retina CAAAAAAAAG (9) 3.9 0.0039 P0.5 retina CCCGGAGCCT 2 0.002 P0.5 retina TGTAACCTGT 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GCCAAGTGGA (4) 103.8 0.1038 P2.5 retina CAGAAGAAAG (4) 37 0.037 P2.5 retina AAACAGGGTC (3) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GCCAAGTGGA (4) 103 0.103 P4.5 retina CAGAAGAAAG (4) 21.8 0.0218 P4.5 retina TGCGCGGTCA 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GCCAAGTGGA (4) 123.4 0.1234 P6.5 retina CAGAAGAAAG (4) 16.7 0.0167 P6.5 retina CAGACAGACA (12) 1.7 0.0017 P6.5 retina CCCGGAGCCT 1.7 0.0017 P10.5 crx- retina GCCAAGTGGA (4) 133.8 0.1338 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina AAACAGGGTC (3) 3.7 0.0037 P10.5 crx- retina CAGAAGAAAG (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GCCAAGTGGA (4) 84.6 0.0846 P10.5 crx+ retina CAGAAGAAAG (4) 3.8 0.0038 P10.5 crx+ retina CAAAAAAAAG (9) 1.9 0.0019 P10.5 crx+ retina CAGACAGACA (12) 1.9 0.0019 Adult retinal GCCAAGTGGA (4) 68.5 0.0685 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAAAAAAAAG (9) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GCCAAGTGGA (4) 23 0.023 ONL AAGCAGGGTC (2) 3.8 0.0038 ONL CAGAAGAAAG (4) 1.9 0.0019 ONL TGTAACCTGT 1.9 0.0019