Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.333349	Prkwnk1	protein kinase, lysine deficient 1	6		232341
Mm.333349	4833412E19Rik	RIKEN cDNA 4833412E19 gene	6		73905
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TGGTGTTTGG (4) 4.9 0.0049 P8 Cb GC GCTAAAGCTA (2) 3.3 0.0033 P8 Cb GC TTGGCCAACC (3) 3.3 0.0033 P8 Cb GC TAACTTTGCC (5) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma ACCCCAGCAG (3) 2.3 0.0023 Cb medulloblastoma CACATCCAAA (2) 2.3 0.0023 Cb medulloblastoma TGGTGTTTGG (4) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TGGTGTTTGG (4) 2.3 0.0023 P8 GC+1d culture CTGCATTTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture TAACTTTGCC (5) 2.3 0.0023 P8 GC+SHH+1d culture CTGCATTTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCACAGCAAC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGTGTTTGG (4) 1.2 0.0012 3T3 fibroblasts TGGTGTTTGG (4) 14 0.014 3T3 fibroblasts GCTAAAGCTA (2) 7 0.007 3T3 fibroblasts CTGCATTTGG (2) 3.5 0.0035 3T3 fibroblasts GTGGCACTTG (4) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TGGTGTTTGG (4) 9.9 0.0099 E15 cortex GCTAAAGCTA (2) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TGGTGTTTGG (4) 4.5 0.0045 P1 cortex TTGGCCAACC (3) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus TGGTGTTTGG (4) 5.4 0.0054 Hypothalamus TCACAGCAAC (4) 1.8 0.0018 Hypothalamus TTGGCCAACC (3) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCTAAAGCTA (2) 1.9 0.0019 E12.5 retina GCTCTGATAC (3) 1.9 0.0019 E12.5 retina TGGTGTTTGG (4) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GCCTAAGGCT (2) 5.5 0.0055 E14.5 retina GCTCTGATAC (3) 1.8 0.0018 E14.5 retina TAACTTTGCC (5) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CACATCCAAA (2) 1.8 0.0018 E16.5 retina GCTCTGATAC (3) 1.8 0.0018 E16.5 retina TAACTTTGCC (5) 1.8 0.0018 E16.5 retina TCACAGCAAC (4) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CACATCCAAA (2) 1.8 0.0018 E18.5 retina TGGTGTTTGG (4) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGGTGTTTGG (4) 5.9 0.0059 P0.5 retina CTGCATTTGG (2) 2 0.002 P0.5 retina TTGGCCAACC (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CTGCATTTGG (2) 3.5 0.0035 P2.5 retina GCTAAAGCTA (2) 1.8 0.0018 P2.5 retina TAACTTTGCC (5) 1.8 0.0018 P2.5 retina TGGTGTTTGG (4) 1.8 0.0018 P2.5 retina TTGGCCAACC (3) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CACATCCAAA (2) 4 0.004 P4.5 retina TGGTGTTTGG (4) 4 0.004 P4.5 retina ACCCCAGCAG (3) 2 0.002 P4.5 retina GCTAAAGCTA (2) 2 0.002 P4.5 retina GCTCTGATAC (3) 2 0.002 P4.5 retina TAACTTTGCC (5) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CACATCCAAA (2) 3.3 0.0033 P6.5 retina ACCCCAGCAG (3) 1.7 0.0017 P6.5 retina TAACTTTGCC (5) 1.7 0.0017 P6.5 retina TCACAGCAAC (4) 1.7 0.0017 P6.5 retina TGGTGTTTGG (4) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCTCTGATAC (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina TAACTTTGCC (5) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CTGCATTTGG (2) 1.9 0.0019 Adult retinal TCACAGCAAC (4) 1.9 0.0019 Adult retinal TTGGCCAACC (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GTGGCACTTG (4) 3.8 0.0038 ONL CACATCCAAA (2) 1.9 0.0019 ONL GCCTAAGGCT (2) 1.9 0.0019 ONL GCTCTGATAC (3) 1.9 0.0019 ONL TGGTGTTTGG (4) 1.9 0.0019 ONL TTGGCCAACC (3) 1.9 0.0019